RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TCF20Q9UGU0 1960 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 SOWAHBA6NEL2 793 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 M0R2C6 588 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 STAT2P52630 851 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 RABGGTBP53611 331 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 MRPS5P82675 430 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 ITGA7Q13683 1181 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 FSCN1Q16658 493 aaKnown RBP16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 EEPD1Q7L9B9 569 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 MICALL1Q8N3F8 863 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 LCTP09848 1927 aa16.68■□□□□ 0.26
SMARCA4-206ENST00000538456 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 PSMC6P62333 389 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 NKX3-2P78367 333 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 FBXO16Q8IX29 292 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 SLC43A3Q8NBI5 491 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 UHRF1Q96T88 793 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 ZNF536O15090 1300 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 GRIN2DO15399 1336 aa16.67■□□□□ 0.26
SMARCA4-206ENST00000538456 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 ASB14A6NK59 587 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 B4GALT4O60513 344 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 CABYRO75952 493 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 ALAS1P13196 640 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 SMPD1P17405 629 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 GNAT2P19087 354 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 SLC1A4P43007 532 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 SNAP25P60880 206 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 PPP2R2DQ66LE6 453 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 WNT8AQ9H1J5 351 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
SMARCA4-206ENST00000538456 ZBBXA8MT70 800 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 ZEB2O60315 1214 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 MYOGP15173 224 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 MCCP23508 829 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 TMEM63BQ5T3F8 832 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 RASGRP2Q7LDG7 609 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 IFNL3Q8IZI9 196 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 NEDD1Q8NHV4 660 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 SCLYQ96I15 445 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 GPATCH3Q96I76 525 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 SCN5AQ14524 2016 aa16.65■□□□□ 0.26
SMARCA4-206ENST00000538456 ZFYP08048 801 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 FDX1P10109 184 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 TFAP4Q01664 338 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 PDE4BQ07343 736 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 MUM1L1Q5H9M0 696 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 GMCL1Q96IK5 515 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 NECAB3Q96P71 396 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 MTMR7Q9Y216 660 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 TRANK1O15050 2925 aa16.64■□□□□ 0.25
SMARCA4-206ENST00000538456 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 TKFCQ3LXA3 575 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 TAPT1Q6NXT6 567 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 MIER1Q8N108 512 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 PURBQ96QR8 312 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 CYP39A1Q9NYL5 469 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 PRRC2BQ5JSZ5 2229 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-206ENST00000538456 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 ATP2A2P16615 1042 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 TFF2Q03403 129 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 PPARAQ07869 468 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 NAPBQ9H115 298 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 CCPG1Q9ULG6 757 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 PCDHA11Q9Y5I1 949 aa16.62■□□□□ 0.25
SMARCA4-206ENST00000538456 NMT2O60551 498 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 CYP2C9P11712 490 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 DEFB128Q7Z7B8 93 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
SMARCA4-206ENST00000538456 TSPY2A6NKD2 308 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms