RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 NOL8Q76FK4 1167 aaKnown RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 EEPD1Q7L9B9 569 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 HERC6Q8IVU3 1022 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 FBXO16Q8IX29 292 aaPredicted RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 RPUSD2Q8IZ73 545 aaKnown RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 TMEM57Q8N5G2 664 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 FAM133AQ8N9E0 248 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 CHMP4CQ96CF2 233 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 SLF1Q9BQI6 1058 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 ALDH8A1Q9H2A2 487 aaPredicted RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 HOMER2Q9NSB8 354 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 SWAP70Q9UH65 585 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 MTUS1Q9ULD2 1270 aa6.31□□□□□ -1.4
CHD4-205ENST00000536301 NOP58Q9Y2X3 529 aaKnown RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 RIF1Q5UIP0 2472 aaKnown RBP6.31□□□□□ -1.4
CHD4-205ENST00000536301 TNKSO95271 1327 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 FAM186AA6NE01 2351 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.3□□□□□ -1.4
CHD4-205ENST00000536301 USP17L12C9JPN9 530 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 USP17L21D6R901 530 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 ANP32CO43423 234 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 MBD4O95243 580 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 KCNA5P22460 613 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SSTR3P32745 418 aaPredicted RBP6.3□□□□□ -1.4
CHD4-205ENST00000536301 COPB2P35606 906 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SNAP25P60880 206 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 DEFB103AP81534 67 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 GPNMBQ14956 572 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SLC9C2Q5TAH2 1124 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 TAPT1Q6NXT6 567 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 HFE2Q6ZVN8 426 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.3□□□□□ -1.4
CHD4-205ENST00000536301 RASGRP2Q7LDG7 609 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 CERS3Q8IU89 383 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 PRSS33Q8NF86 280 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SLC9A7Q96T83 725 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SH2D4AQ9H788 454 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 SLC38A10Q9HBR0 1119 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 IL1RAPL2Q9NP60 686 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
CHD4-205ENST00000536301 MICAL3Q7RTP6 2002 aa6.3□□□□□ -1.4
CHD4-205ENST00000536301 ZBED9Q6R2W3 1325 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 POTEB3A0JP26 581 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 F5H6K3 240 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 H3BQ06 376 aaPredicted RBP6.29□□□□□ -1.4
CHD4-205ENST00000536301 GOLIM4O00461 696 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 ATP2A1O14983 1001 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 IGSF3O75054 1194 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 CABYRO75952 493 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 IQCF3P0C7M6 154 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 RASA1P20936 1047 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 KLRC3Q07444 240 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 LEXMQ3ZCV2 418 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 PTCRAQ6ISU1 281 aaPredicted RBP6.29□□□□□ -1.4
CHD4-205ENST00000536301 POTEBQ6S5H4 581 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 AACSQ86V21 672 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
CHD4-205ENST00000536301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD4-205ENST00000536301 CCDC17Q96LX7 622 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 CTAGE1Q96RT6 745 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 DNAJC2Q99543 621 aaKnown RBP6.29□□□□□ -1.4
CHD4-205ENST00000536301 KANSL2Q9H9L4 492 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 GOPCQ9HD26 462 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 EXOC6BQ9Y2D4 811 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 ZFHX2Q9C0A1 2572 aaPredicted RBP6.29□□□□□ -1.4
CHD4-205ENST00000536301 DMDP11532 3685 aa6.29□□□□□ -1.4
CHD4-205ENST00000536301 ZNF536O15090 1300 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 DCHS1Q96JQ0 3298 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 MYO15AQ9UKN7 3530 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 IGKV6D-41A0A0C4DH26 115 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 GRXCR2A6NFK2 248 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 DCXO43602 365 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 ZBED4O75132 1171 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 MYL3P08590 195 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 ADD2P35612 726 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 WDR5P61964 334 aaKnown RBP6.28□□□□□ -1.4
CHD4-205ENST00000536301 PURAQ00577 322 aaKnown RBP6.28□□□□□ -1.4
CHD4-205ENST00000536301 NBPF20Q3BBV1 942 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 FAM47CQ5HY64 1035 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 IER5LQ5T953 404 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 FAM117BQ6P1L5 589 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 CTR9Q6PD62 1173 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 PRPF38AQ8NAV1 312 aaKnown RBP6.28□□□□□ -1.4
CHD4-205ENST00000536301 PHOSPHO2Q8TCD6 241 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 ARHGAP45Q92619 1136 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 FRAT1Q92837 279 aaPredicted RBP6.28□□□□□ -1.4
CHD4-205ENST00000536301 COPS5Q92905 334 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 C17orf80Q9BSJ5 609 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHD4-205ENST00000536301 AP5M1Q9H0R1 490 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 RNF146Q9NTX7 359 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 PLXNA3P51805 1871 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 NLRC5Q86WI3 1866 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 KMT2EQ8IZD2 1858 aa6.28□□□□□ -1.4
CHD4-205ENST00000536301 LINC01553A4QN01 128 aa6.27□□□□□ -1.41
CHD4-205ENST00000536301 PFKMP08237 780 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms