RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CTCFLQ8NI51 663 aaPredicted RBP20.8■□□□□ 0.92
DDX55-204ENST00000536079 TBC1D5Q92609 795 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 MAML3Q96JK9 1138 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
DDX55-204ENST00000536079 DDX49Q9Y6V7 483 aaKnown RBP20.8■□□□□ 0.92
DDX55-204ENST00000536079 BRCA2P51587 3418 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 CCL5P13501 91 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 CDC27P30260 824 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 CACNB2Q08289 660 aaPredicted RBP20.79■□□□□ 0.92
DDX55-204ENST00000536079 MAP3K21Q5TCX8 1036 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 TMTC3Q6ZXV5 915 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 HOMER1Q86YM7 354 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 ANKRD35Q8N283 1001 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 CCDC82Q8N4S0 544 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 TRPV1Q8NER1 839 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
DDX55-204ENST00000536079 ASTN1O14525 1302 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 hCG_1642624A0A1W2PR95 340 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 SOWAHBA6NEL2 793 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 ZBTB5O15062 677 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 ZBTB43O43298 467 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 CALM1P0DP23 149 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 CALM2P0DP24 149 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 CALM3P0DP25 149 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 ANAPC15P60006 121 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 FGD1P98174 961 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 FUT2Q10981 343 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 PRAMEF19Q5SWL8 479 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 FBXO11Q86XK2 927 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 DDX11Q96FC9 970 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 PDRG1Q9NUG6 133 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 CYP39A1Q9NYL5 469 aa20.78■□□□□ 0.92
DDX55-204ENST00000536079 ZNFX1Q9P2E3 1918 aaKnown RBP20.78■□□□□ 0.92
DDX55-204ENST00000536079 GOLGA8AA7E2F4 631 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 GOLGA8BA8MQT2 603 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 OPLAHO14841 1288 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 PRKAR2AP13861 404 aaKnown RBP20.77■□□□□ 0.92
DDX55-204ENST00000536079 CCND3P30281 292 aaPredicted RBP20.77■□□□□ 0.92
DDX55-204ENST00000536079 KIF5BP33176 963 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 BAATQ14032 418 aaPredicted RBP20.77■□□□□ 0.92
DDX55-204ENST00000536079 OLFML2BQ68BL8 750 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 SLC30A10Q6XR72 485 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 FAM133AQ8N9E0 248 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 KIF2CQ99661 725 aa20.77■□□□□ 0.92
DDX55-204ENST00000536079 NAP1L2Q9ULW6 460 aaPredicted RBP20.77■□□□□ 0.92
DDX55-204ENST00000536079 BAZ2BQ9UIF8 2168 aaKnown RBP20.77■□□□□ 0.92
DDX55-204ENST00000536079 ADD1P35611 737 aaKnown RBP20.76■□□□□ 0.91
DDX55-204ENST00000536079 EVCP57679 992 aa20.76■□□□□ 0.91
DDX55-204ENST00000536079 UBXN2AP68543 259 aa20.76■□□□□ 0.91
DDX55-204ENST00000536079 RTN1Q16799 776 aa20.76■□□□□ 0.91
DDX55-204ENST00000536079 SYNE3Q6ZMZ3 975 aa20.76■□□□□ 0.91
DDX55-204ENST00000536079 RNF208Q9H0X6 261 aa20.76■□□□□ 0.91
DDX55-204ENST00000536079 DIS3Q9Y2L1 958 aaKnown RBP20.76■□□□□ 0.91
DDX55-204ENST00000536079 PNMA6FA0A0J9YX94 578 aa20.75■□□□□ 0.91
DDX55-204ENST00000536079 PDIA3P30101 505 aaKnown RBP20.75■□□□□ 0.91
DDX55-204ENST00000536079 GNAQP50148 359 aa20.75■□□□□ 0.91
DDX55-204ENST00000536079 TRMT44Q8IYL2 757 aaKnown RBP20.75■□□□□ 0.91
DDX55-204ENST00000536079 ABCB11O95342 1321 aa20.75■□□□□ 0.91
DDX55-204ENST00000536079 POTEB2H3BUK9 544 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 SNAI1O95863 264 aaPredicted RBP20.74■□□□□ 0.91
DDX55-204ENST00000536079 EN2P19622 333 aaPredicted RBP20.74■□□□□ 0.91
DDX55-204ENST00000536079 SMARCA1P28370 1054 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 MFSD14CQ5VZR4 134 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 LZTS2Q9BRK4 669 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 TINF2Q9BSI4 451 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 AMNQ9BXJ7 453 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 NCOA5Q9HCD5 579 aaKnown RBP20.74■□□□□ 0.91
DDX55-204ENST00000536079 COL20A1Q9P218 1284 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 PCDHA1Q9Y5I3 950 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 CNTNAP5Q8WYK1 1306 aa20.74■□□□□ 0.91
DDX55-204ENST00000536079 PTPDC1A2A3K4 754 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 EIF5BO60841 1220 aaKnown RBP20.73■□□□□ 0.91
DDX55-204ENST00000536079 PPFIA3O75145 1194 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 CALML3P27482 149 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 METAP2P50579 478 aaKnown RBP eCLIP20.73■□□□□ 0.91
DDX55-204ENST00000536079 RPS6P62753 249 aaKnown RBP20.73■□□□□ 0.91
DDX55-204ENST00000536079 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
DDX55-204ENST00000536079 C22orf23Q9BZE7 217 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.73■□□□□ 0.91
DDX55-204ENST00000536079 PAK6Q9NQU5 681 aaPredicted RBP20.73■□□□□ 0.91
DDX55-204ENST00000536079 SLC5A4Q9NY91 659 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 PFASO15067 1338 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 RPTORQ8N122 1335 aa20.73■□□□□ 0.91
DDX55-204ENST00000536079 LCTP09848 1927 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 NID2Q14112 1375 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 CYBAP13498 195 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 RCAN1P53805 252 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 AK2P54819 239 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
DDX55-204ENST00000536079 RNF207Q6ZRF8 634 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 ALDH8A1Q9H2A2 487 aaPredicted RBP20.72■□□□□ 0.91
DDX55-204ENST00000536079 RBM28Q9NW13 759 aaKnown RBP20.72■□□□□ 0.91
DDX55-204ENST00000536079 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 TPCN1Q9ULQ1 816 aa20.72■□□□□ 0.91
DDX55-204ENST00000536079 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
DDX55-204ENST00000536079 DTNBO60941 627 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms