RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 PCNTO95613 3336 aa10.09□□□□□ -0.79
LMO3-212ENST00000535535 EDC4Q6P2E9 1401 aaKnown RBP10.09□□□□□ -0.79
LMO3-212ENST00000535535 ITIH2P19823 946 aa10.08□□□□□ -0.8
LMO3-212ENST00000535535 AOC3Q16853 763 aa10.08□□□□□ -0.8
LMO3-212ENST00000535535 GAL3ST3Q96A11 431 aa10.08□□□□□ -0.8
LMO3-212ENST00000535535 MBNL3Q9NUK0 354 aaKnown RBP10.08□□□□□ -0.8
LMO3-212ENST00000535535 USP47Q96K76 1375 aa10.08□□□□□ -0.8
LMO3-212ENST00000535535 BRCA1P38398 1863 aaKnown RBP10.07□□□□□ -0.8
LMO3-212ENST00000535535 MAP2P11137 1827 aaKnown RBP10.07□□□□□ -0.8
LMO3-212ENST00000535535 RNASE1P07998 156 aaKnown RBP10.07□□□□□ -0.8
LMO3-212ENST00000535535 ROCK2O75116 1388 aaKnown RBP10.07□□□□□ -0.8
LMO3-212ENST00000535535 N4BP2Q86UW6 1770 aaPredicted RBP10.07□□□□□ -0.8
LMO3-212ENST00000535535 IGF2BP3O00425 579 aaKnown RBP eCLIP10.06□□□□□ -0.8
LMO3-212ENST00000535535 LDHBP07195 334 aaKnown RBP10.06□□□□□ -0.8
LMO3-212ENST00000535535 LRFN4Q6PJG9 635 aa10.06□□□□□ -0.8
LMO3-212ENST00000535535 POU5F2Q8N7G0 328 aa10.06□□□□□ -0.8
LMO3-212ENST00000535535 IP6K1Q92551 441 aa10.06□□□□□ -0.8
LMO3-212ENST00000535535 PICK1Q9NRD5 415 aa10.06□□□□□ -0.8
LMO3-212ENST00000535535 GTF2IRD1Q9UHL9 959 aa10.06□□□□□ -0.8
LMO3-212ENST00000535535 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
LMO3-212ENST00000535535 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
LMO3-212ENST00000535535 ARMCX6Q7L4S7 300 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 SPACA3Q8IXA5 215 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 SECISBP2LQ93073 1101 aaKnown RBP10.05□□□□□ -0.8
LMO3-212ENST00000535535 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 RC3H2Q9HBD1 1191 aaKnown RBP10.05□□□□□ -0.8
LMO3-212ENST00000535535 SNX11Q9Y5W9 270 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 A0A1W2PP64 1363 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
LMO3-212ENST00000535535 EOMESO95936 686 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 INPP5AQ14642 412 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 SV2BQ7L1I2 683 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 ATG4DQ86TL0 474 aaPredicted RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 KCT2Q8NC54 265 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 ELMO3Q96BJ8 720 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 LTV1Q96GA3 475 aaPredicted RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 FRMD6Q96NE9 622 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 ARFGEF1Q9Y6D6 1849 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 ANGEL2Q5VTE6 544 aaKnown RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 DNAJC5GQ8N7S2 189 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
LMO3-212ENST00000535535 TTF2Q9UNY4 1162 aaKnown RBP10.04□□□□□ -0.8
LMO3-212ENST00000535535 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 BIN1O00499 593 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 MAFGO15525 162 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 GNA15P30679 374 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 CYFIP1Q7L576 1253 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 PLPPR2Q96GM1 343 aa10.03□□□□□ -0.8
LMO3-212ENST00000535535 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 LRIG2O94898 1065 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
LMO3-212ENST00000535535 HOXC9P31274 260 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 NKPD1Q17RQ9 610 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
LMO3-212ENST00000535535 CDC37L1Q7L3B6 337 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
LMO3-212ENST00000535535 AMIGO3Q86WK7 504 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 PI4K2BQ8TCG2 481 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 FBRSQ9HAH7 460 aa10.02□□□□□ -0.81
LMO3-212ENST00000535535 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 KIF20BQ96Q89 1820 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 PRPF40AO75400 957 aaKnown RBP10.01□□□□□ -0.81
LMO3-212ENST00000535535 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
LMO3-212ENST00000535535 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
LMO3-212ENST00000535535 SLC12A5Q9H2X9 1139 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 CWC22Q9HCG8 908 aaKnown RBP10.01□□□□□ -0.81
LMO3-212ENST00000535535 MAPK8IP1Q9UQF2 711 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
LMO3-212ENST00000535535 TOMM70O94826 608 aa10□□□□□ -0.81
LMO3-212ENST00000535535 SLITRK5O94991 958 aa10□□□□□ -0.81
LMO3-212ENST00000535535 EIF4BP23588 611 aaKnown RBP10□□□□□ -0.81
LMO3-212ENST00000535535 TTBK2Q6IQ55 1244 aa10□□□□□ -0.81
LMO3-212ENST00000535535 SLC23A3Q6PIS1 610 aa10□□□□□ -0.81
LMO3-212ENST00000535535 PRDM5Q9NQX1 630 aaPredicted RBP10□□□□□ -0.81
LMO3-212ENST00000535535 PXDNLA1KZ92 1463 aa10□□□□□ -0.81
LMO3-212ENST00000535535 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
LMO3-212ENST00000535535 PATL2C9JE40 543 aaKnown RBP9.99□□□□□ -0.81
LMO3-212ENST00000535535 CLGNO14967 610 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 SBF1O95248 1867 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 ANAPC15P60006 121 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 SLBPQ14493 270 aaKnown RBP eCLIP9.99□□□□□ -0.81
LMO3-212ENST00000535535 HDXQ7Z353 690 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 PRDM16Q9HAZ2 1276 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 TERF2IPQ9NYB0 399 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 PITPNM2Q9BZ72 1349 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 C4AP0C0L4 1744 aa9.99□□□□□ -0.81
LMO3-212ENST00000535535 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
LMO3-212ENST00000535535 C8AP07357 584 aa9.98□□□□□ -0.81
LMO3-212ENST00000535535 CAP2P40123 477 aa9.98□□□□□ -0.81
LMO3-212ENST00000535535 CDK8P49336 464 aa9.98□□□□□ -0.81
LMO3-212ENST00000535535 AMPHP49418 695 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms