RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 A0A1W2PQ45 241 aaPredicted RBP10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 A0A1W2PQY0 241 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 MYADML2A6NDP7 307 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 SOWAHBA6NEL2 793 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 ADCY6O43306 1168 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 KDM4AO75164 1064 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 DUSP11O75319 330 aaKnown RBP10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 ICAM1P05362 532 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 ZNF543Q08ER8 600 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 SNX17Q15036 470 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 CCDC144BQ3MJ40 725 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 IQCA1Q86XH1 822 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 IL25Q9H293 177 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 CYP39A1Q9NYL5 469 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.81
SFSWAP-202ENST00000535202 ASB14A6NK59 587 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 PQBP1O60828 265 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 C6orf222P0C671 652 aaPredicted RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 SNHG28P0DPA3 235 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 ACLYP53396 1101 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 TLE2Q04725 743 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 KCNA10Q16322 511 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 NOL8Q76FK4 1167 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 DGKHQ86XP1 1220 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 KLHDC9Q8NEP7 349 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 KATNBL1Q9H079 304 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 SPC25Q9HBM1 224 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 STARD7Q9NQZ5 370 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 PDLIM7Q9NR12 457 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 DDX49Q9Y6V7 483 aaKnown RBP10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 RAD50Q92878 1312 aa10.01□□□□□ -0.81
SFSWAP-202ENST00000535202 C11orf97A0A1B0GVM6 126 aaPredicted RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 PTPDC1A2A3K4 754 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 NFIBO00712 420 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 NT5C2P49902 561 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 TNFAIP2Q03169 654 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 BAATQ14032 418 aaPredicted RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 GPATCH4Q5T3I0 446 aaKnown RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 EEPD1Q7L9B9 569 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 FBXO16Q8IX29 292 aaPredicted RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 PCSK9Q8NBP7 692 aaKnown RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 PNMA1Q8ND90 353 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 NUP133Q8WUM0 1156 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 BADQ92934 168 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 ZSCAN10Q96SZ4 725 aaPredicted RBP10□□□□□ -0.81
SFSWAP-202ENST00000535202 KRT23Q9C075 422 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 CPVLQ9H3G5 476 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 ZSWIM5Q9P217 1185 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 ASTN1O14525 1302 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 TNKSO95271 1327 aa10□□□□□ -0.81
SFSWAP-202ENST00000535202 MYH6P13533 1939 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 TRIM43BA6NCK2 446 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 ASGR1P07306 291 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CLTBP09497 229 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CALML3P27482 149 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CST5P28325 142 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 ALDH5A1P51649 535 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 GJA9P57773 515 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 BEX3Q00994 111 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 LRIT3Q3SXY7 679 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 USH1GQ495M9 461 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 GNASQ5JWF2 1037 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CCSAPQ6IQ19 270 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 SLC30A10Q6XR72 485 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 TLK2Q86UE8 772 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 ENAHQ8N8S7 591 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 RUFY2Q8WXA3 655 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CLEC4DQ8WXI8 215 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 TRIM43Q96BQ3 446 aaPredicted RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 GLT1D1Q96MS3 346 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 UBAC1Q9BSL1 405 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 UBA5Q9GZZ9 404 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 ZMYND15Q9H091 742 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 UPF3AQ9H1J1 476 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 CNNM2Q9H8M5 875 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 PDGFCQ9NRA1 345 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 ADD3Q9UEY8 706 aaKnown RBP9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 PNMA2Q9UL42 364 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
SFSWAP-202ENST00000535202 DHX16O60231 1041 aaKnown RBP9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 SMPD1P17405 629 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 PTGS1P23219 599 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 CHMLP26374 656 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 PTH1RQ03431 593 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 CDC37Q16543 378 aaPredicted RBP9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 IFIT1BQ5T764 474 aaKnown RBP9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 RNF207Q6ZRF8 634 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 AP5M1Q9H0R1 490 aa9.98□□□□□ -0.81
SFSWAP-202ENST00000535202 VTA1Q9NP79 307 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms