RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RETREG2Q8NC44 543 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 ZNF526Q8TF50 670 aaPredicted RBP1.82□□□□□ -2.12
COPB1-212ENST00000534771 GATAD2BQ8WXI9 593 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.82□□□□□ -2.122e-11■■■■□ 22.6
COPB1-212ENST00000534771 TNFRSF12AQ9NP84 129 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 REV1Q9UBZ9 1251 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 KLHL3Q9UH77 587 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 FAN1Q9Y2M0 1017 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 AK5Q9Y6K8 562 aa1.82□□□□□ -2.12
COPB1-212ENST00000534771 FAM221AA4D161 298 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 NOBOXO60393 691 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 PRAMEF1O95521 474 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 PLA2G1BP04054 148 aaKnown RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 LDHBP07195 334 aaKnown RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 ATF2P15336 505 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 GNA15P30679 374 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 GJA9P57773 515 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 HTRA3P83110 453 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 RAD51AP2Q09MP3 1159 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 KIAA2012Q0VF49 1180 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 CAMK2GQ13555 558 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 GRM7Q14831 915 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 BBS9Q3SYG4 887 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 PLEKHN1Q494U1 663 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 TBC1D10BQ4KMP7 808 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 NBPF12Q5TAG4 269 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 HLA-DQA1Q5Y7H0 255 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 PAQR3Q6TCH7 311 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 BNC2Q6ZN30 1099 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 SLCO6A1Q86UG4 719 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 ASB16Q96NS5 453 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 NOC4LQ9BVI4 516 aaKnown RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 CDADC1Q9BWV3 514 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 LNPKQ9C0E8 428 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 PRDM14Q9GZV8 571 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 ANTXR1Q9H6X2 564 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 CHST7Q9NS84 486 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 IMPACTQ9P2X3 320 aa1.81□□□□□ -2.12
COPB1-212ENST00000534771 GPR55Q9Y2T6 319 aaPredicted RBP1.81□□□□□ -2.12
COPB1-212ENST00000534771 F8W031 263 aaPredicted RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 SIGLEC6O43699 453 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 DNAJA2O60884 412 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 UBOX5O94941 541 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 HTR3BO95264 441 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 PLATP00750 562 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 PF4P02776 101 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 CYBBP04839 570 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 DBHP09172 617 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 VAV1P15498 845 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 RAG1P15918 1043 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 BMP8BP34820 402 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 SARSP49591 514 aaKnown RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 PRR5P85299 388 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 LMNB2Q03252 620 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 SNW1Q13573 536 aaKnown RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 TAF1CQ15572 869 aaPredicted RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 ARSHQ5FYA8 562 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 TTLL7Q6ZT98 887 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 JAMLQ86YT9 394 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 RELL1Q8IUW5 271 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 PHC3Q8NDX5 983 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 TMEM52Q8NDY8 209 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 JMJD8Q96S16 334 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 RNF38Q9H0F5 515 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 C1orf115Q9H7X2 142 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 AP5S1Q9NUS5 200 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 ERVK13-1Q9NX77 482 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 DBR1Q9UK59 544 aaKnown RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 FBXL21Q9UKT6 434 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 MINPP1Q9UNW1 487 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 GNEQ9Y223 722 aaKnown RBP1.8□□□□□ -2.12
COPB1-212ENST00000534771 HCFC2Q9Y5Z7 792 aa1.8□□□□□ -2.12
COPB1-212ENST00000534771 INO80B-WBP1J3KQ70 363 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 MEIS1O00470 390 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 SRGAP3O43295 1099 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 PRPF40AO75400 957 aaKnown RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 CLEC3AO75596 197 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 ZNF205O95201 554 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 F13A1P00488 732 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 NOP2P46087 812 aaKnown RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 CEBPAP49715 358 aaPredicted RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 DLX2Q07687 328 aaPredicted RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 MPP2Q14168 576 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 MEI1Q5TIA1 1274 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 BICRALQ6AI39 1079 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 GLB1LQ6UWU2 654 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 LIMS2Q7Z4I7 341 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 USP48Q86UV5 1035 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 ZNF761Q86XN6 746 aaPredicted RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 AMER2Q8N7J2 671 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 RGS22Q8NE09 1264 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 NLGN2Q8NFZ4 835 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 INO80BQ9C086 356 aaPredicted RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 PDLIM7Q9NR12 457 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 NTMQ9P121 344 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 POLR3KQ9Y2Y1 108 aaPredicted RBP1.79□□□□□ -2.12
COPB1-212ENST00000534771 USP31Q70CQ4 1352 aa1.79□□□□□ -2.12
COPB1-212ENST00000534771 ZNF536O15090 1300 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 MINDY4BA8MYZ0 360 aa1.78□□□□□ -2.12
COPB1-212ENST00000534771 F6X3S4 739 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms