RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CABYRO75952 493 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 ALAS1P13196 640 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 FSCN1Q16658 493 aaKnown RBP25.3■■□□□ 1.64
SSH3-211ENST00000534112 ZMYM1Q5SVZ6 1142 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 TLK2Q86UE8 772 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 PI4K2BQ8TCG2 481 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 IL23AQ9NPF7 189 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 PRDM6Q9NQX0 595 aa25.3■■□□□ 1.64
SSH3-211ENST00000534112 DDX49Q9Y6V7 483 aaKnown RBP25.3■■□□□ 1.64
SSH3-211ENST00000534112 MYH4Q9Y623 1939 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 MCM3APO60318 1980 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 ERC2O15083 957 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 DYNC1LI2O43237 492 aaPredicted RBP25.29■■□□□ 1.64
SSH3-211ENST00000534112 SMPD1P17405 629 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 SNAP25P60880 206 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 TJAP1Q5JTD0 557 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 PPP4R3BQ5MIZ7 849 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 RCSD1Q6JBY9 416 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 KCTD1Q719H9 257 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 HERVK_113Q902F9 699 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 GAS2L1Q99501 681 aaPredicted RBP25.29■■□□□ 1.64
SSH3-211ENST00000534112 FSD1Q9BTV5 496 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 AP5M1Q9H0R1 490 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 STX8Q9UNK0 236 aa25.29■■□□□ 1.64
SSH3-211ENST00000534112 PTGS1P23219 599 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 ITGA7Q13683 1181 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 HIPK3Q9H422 1215 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 PRDM12Q9H4Q4 367 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 INCENPQ9NQS7 918 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 PDGFCQ9NRA1 345 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 IL17RBQ9NRM6 502 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 CYP39A1Q9NYL5 469 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.28■■□□□ 1.64
SSH3-211ENST00000534112 GRIN2DO15399 1336 aa25.28■■□□□ 1.64
SSH3-211ENST00000534112 MUM1L1Q5H9M0 696 aa25.27■■□□□ 1.64
SSH3-211ENST00000534112 IQSEC1Q6DN90 963 aa25.27■■□□□ 1.64
SSH3-211ENST00000534112 TAPT1Q6NXT6 567 aa25.27■■□□□ 1.64
SSH3-211ENST00000534112 OTUD7AQ8TE49 926 aaPredicted RBP25.27■■□□□ 1.64
SSH3-211ENST00000534112 CXXC1Q9P0U4 656 aaPredicted RBP25.27■■□□□ 1.64
SSH3-211ENST00000534112 PRR12Q9ULL5 1215 aa25.27■■□□□ 1.64
SSH3-211ENST00000534112 CHD9Q3L8U1 2897 aa25.27■■□□□ 1.64
SSH3-211ENST00000534112 TSPY2A6NKD2 308 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 ZEB2O60315 1214 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 NMT2O60551 498 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 FGBP02675 491 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 EEPD1Q7L9B9 569 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 PPM1EQ8WY54 764 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 SEZ6LQ9BYH1 1024 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 MTIF3Q9H2K0 278 aaKnown RBP25.26■■□□□ 1.63
SSH3-211ENST00000534112 MSRAQ9UJ68 235 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 Q9Y3F1 56 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 UMODL1Q5DID0 1318 aa25.26■■□□□ 1.63
SSH3-211ENST00000534112 FOXP2O15409 715 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 CTDSPL2Q05D32 466 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 RAB30Q15771 203 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 AKNAD1Q5T1N1 836 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 TMEM63BQ5T3F8 832 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 RASGRP2Q7LDG7 609 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 FBXO16Q8IX29 292 aaPredicted RBP25.25■■□□□ 1.63
SSH3-211ENST00000534112 TRPV6Q9H1D0 765 aa25.25■■□□□ 1.63
SSH3-211ENST00000534112 NSMFQ6X4W1 530 aa25.24■■□□□ 1.63
SSH3-211ENST00000534112 PURBQ96QR8 312 aaKnown RBP25.24■■□□□ 1.63
SSH3-211ENST00000534112 NOC4LQ9BVI4 516 aaKnown RBP25.24■■□□□ 1.63
SSH3-211ENST00000534112 CCPG1Q9ULG6 757 aa25.24■■□□□ 1.63
SSH3-211ENST00000534112 MYO9BQ13459 2157 aa25.24■■□□□ 1.63
SSH3-211ENST00000534112 B4GALT4O60513 344 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 CCL23P55773 120 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 PSMC6P62333 389 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 ADGRE1Q14246 886 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 OTOP2Q7RTS6 562 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 VTA1Q9NP79 307 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 MTMR7Q9Y216 660 aa25.23■■□□□ 1.63
SSH3-211ENST00000534112 RANBP6O60518 1105 aaKnown RBP25.22■■□□□ 1.63
SSH3-211ENST00000534112 ICAM1P05362 532 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 NOVP48745 357 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 KIAA1211Q6ZU35 1233 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 MORC4Q8TE76 937 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 NKX2-4Q9H2Z4 354 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 PCDHB15Q9Y5E8 787 aa25.22■■□□□ 1.63
SSH3-211ENST00000534112 MX1P20591 662 aa25.21■■□□□ 1.63
SSH3-211ENST00000534112 ATXN2LQ8WWM7 1075 aaKnown RBP25.21■■□□□ 1.63
SSH3-211ENST00000534112 WNT8AQ9H1J5 351 aa25.21■■□□□ 1.63
SSH3-211ENST00000534112 SLC28A3Q9HAS3 691 aa25.21■■□□□ 1.63
SSH3-211ENST00000534112 ANAPC4Q9UJX5 808 aa25.21■■□□□ 1.63
SSH3-211ENST00000534112 YBX2Q9Y2T7 364 aaKnown RBP25.21■■□□□ 1.63
SSH3-211ENST00000534112 BAATQ14032 418 aaPredicted RBP25.2■■□□□ 1.62
SSH3-211ENST00000534112 CCDC96Q2M329 555 aa25.2■■□□□ 1.62
SSH3-211ENST00000534112 DUSP28Q4G0W2 176 aa25.2■■□□□ 1.62
SSH3-211ENST00000534112 TTBK2Q6IQ55 1244 aa25.2■■□□□ 1.62
SSH3-211ENST00000534112 DCAF4Q8WV16 495 aa25.2■■□□□ 1.62
SSH3-211ENST00000534112 RANBP17Q9H2T7 1088 aaKnown RBP25.2■■□□□ 1.62
SSH3-211ENST00000534112 TNFRSF10AO00220 468 aa25.19■■□□□ 1.62
SSH3-211ENST00000534112 IGFBP4P22692 258 aa25.19■■□□□ 1.62
SSH3-211ENST00000534112 SLC16A2P36021 539 aa25.19■■□□□ 1.62
SSH3-211ENST00000534112 VPS53Q5VIR6 699 aa25.19■■□□□ 1.62
SSH3-211ENST00000534112 RPUSD2Q8IZ73 545 aaKnown RBP25.19■■□□□ 1.62
SSH3-211ENST00000534112 ALDH8A1Q9H2A2 487 aaPredicted RBP25.19■■□□□ 1.62
SSH3-211ENST00000534112 ADD3Q9UEY8 706 aaKnown RBP25.19■■□□□ 1.62
SSH3-211ENST00000534112 CHD7Q9P2D1 2997 aa25.19■■□□□ 1.62
SSH3-211ENST00000534112 ORC4O43929 436 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms