RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 RNPC3Q96LT9 517 aaKnown RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 ASB2Q96Q27 587 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 AS3MTQ9HBK9 375 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 MORF4L1Q9UBU8 362 aa6.77□□□□□ -1.33
CHKA-204ENST00000528235 ATXN7L1Q9ULK2 861 aaPredicted RBP6.77□□□□□ -1.33
CHKA-204ENST00000528235 MYH1P12882 1939 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 KBTBD13C9JR72 458 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 GRM8O00222 908 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 DNM1LO00429 736 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 GLRX3O76003 335 aaKnown RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 PDE8BO95263 885 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 MSX1P28360 303 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 PICALMQ13492 652 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 TLR1Q15399 786 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 CCL14Q16627 93 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 OXLD1Q5BKU9 147 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 SLC39A5Q6ZMH5 540 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 TEX2Q8IWB9 1127 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 GALNT6Q8NCL4 622 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 ARRDC4Q8NCT1 418 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 LPAR1Q92633 364 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 TSR2Q969E8 191 aaKnown RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 EDC3Q96F86 508 aaKnown RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 OSBPL5Q9H0X9 879 aaPredicted RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 RUBCNLQ9H714 662 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHKA-204ENST00000528235 ETNK1Q9HBU6 452 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 TMOD4Q9NZQ9 345 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 DDX20Q9UHI6 824 aaKnown RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 SYNGAP1Q96PV0 1343 aa6.76□□□□□ -1.33
CHKA-204ENST00000528235 MYBBP1AQ9BQG0 1328 aaKnown RBP6.76□□□□□ -1.33
CHKA-204ENST00000528235 DDTLA6NHG4 134 aaPredicted RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 USP17L5A8MUK1 530 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 THBS1P07996 1170 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 SLC5A1P13866 664 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 NCLP19338 710 aaKnown RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 DEKP35659 375 aaKnown RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 ATP2B2Q01814 1243 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 CCDC85BQ15834 202 aaPredicted RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 MAP7D1Q3KQU3 841 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 LRRC24Q50LG9 513 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 GJC2Q5T442 439 aaPredicted RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 BEND3Q5T5X7 828 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 WDR78Q5VTH9 848 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 TBC1D9Q6ZT07 1266 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 GPR142Q7Z601 462 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 PLEKHH3Q7Z736 793 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 ALYREFQ86V81 257 aaKnown RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 P2RX7Q99572 595 aaKnown RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 APBA2Q99767 749 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 PAGR1Q9BTK6 254 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 IDI2Q9BXS1 227 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 GNL3LQ9NVN8 582 aaKnown RBP6.75□□□□□ -1.33
CHKA-204ENST00000528235 MYH8P13535 1937 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 FOCADQ5VW36 1801 aa6.75□□□□□ -1.33
CHKA-204ENST00000528235 ATRNL1Q5VV63 1379 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 F6X3S4 739 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 PIK3R2O00459 728 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 BMP4P12644 408 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 RAG1P15918 1043 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 IGFBP4P22692 258 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 PRDX5P30044 214 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 HERVK_113P62684 666 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 ERVK-24P63145 666 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 PUM3Q15397 648 aaKnown RBP6.74□□□□□ -1.33
CHKA-204ENST00000528235 TRIM60Q495X7 471 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 AKNAD1Q5T1N1 836 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 SLC4A10Q6U841 1118 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 CCDC129Q6ZRS4 1044 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 ZGPATQ8N5A5 531 aaKnown RBP6.74□□□□□ -1.33
CHKA-204ENST00000528235 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 IPO4Q8TEX9 1081 aaKnown RBP6.74□□□□□ -1.33
CHKA-204ENST00000528235 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
CHKA-204ENST00000528235 EDARADDQ8WWZ3 215 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 TIFAQ96CG3 184 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 CRISPLD1Q9H336 500 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 PDLIM7Q9NR12 457 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
CHKA-204ENST00000528235 TACC3Q9Y6A5 838 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 IVNS1ABPQ9Y6Y0 642 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 UTYO14607 1347 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 KIF16BQ96L93 1317 aa6.74□□□□□ -1.33
CHKA-204ENST00000528235 LRRC37A2A6NM11 1700 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
CHKA-204ENST00000528235 FAM196BA6NMK8 535 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 PEX10O60683 326 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 ALDH1L1O75891 902 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 FGFR3P22607 806 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 HOXA7P31268 230 aaPredicted RBP6.73□□□□□ -1.33
CHKA-204ENST00000528235 CCNA1P78396 465 aa6.73□□□□□ -1.33
CHKA-204ENST00000528235 FPGSQ05932 587 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms