RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 PARP14Q460N5 1801 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 TNPO2O14787 897 aaKnown RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 ELNP15502 786 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 PSMA5P28066 241 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 GCLCP48506 637 aaPredicted RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 COG2Q14746 738 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 Q3C1V9 767 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 ADCK5Q3MIX3 580 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 LRRC2Q9BYS8 371 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 FRMPD2Q68DX3 1309 aaPredicted RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
CCDC84-205ENST00000528088 MGAMO43451 1857 aa12.86□□□□□ -0.35
CCDC84-205ENST00000528088 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 ADCY3O60266 1144 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 PLS1Q14651 629 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 RCSD1Q6JBY9 416 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 GTF3C2Q8WUA4 911 aaPredicted RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 SHISA4Q96DD7 197 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 GMCL1Q96IK5 515 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 TCEANC2Q96MN5 208 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 FBXO28Q9NVF7 368 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 HOXC10Q9NYD6 342 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 MORF4L1Q9UBU8 362 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 CCL5P13501 91 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 STAT2P52630 851 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 ANTXR2P58335 489 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 TSGA10IPQ3SY00 556 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 DHX32Q7L7V1 743 aaKnown RBP12.85□□□□□ -0.35
CCDC84-205ENST00000528088 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 NUP133Q8WUM0 1156 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 UNC93B1Q9H1C4 597 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 GJD2Q9UKL4 321 aa12.85□□□□□ -0.35
CCDC84-205ENST00000528088 MYH6P13533 1939 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 CNMDO75829 334 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 AP1G2O75843 785 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 PDHBP11177 359 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 CPA1P15085 419 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 SEC23AQ15436 765 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 COA7Q96BR5 231 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 ATG4CQ96DT6 458 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
CCDC84-205ENST00000528088 RLFQ13129 1914 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
CCDC84-205ENST00000528088 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
CCDC84-205ENST00000528088 INHAP05111 366 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 PARP1P09874 1014 aaKnown RBP12.83□□□□□ -0.36
CCDC84-205ENST00000528088 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 PDIA4P13667 645 aaKnown RBP12.83□□□□□ -0.36
CCDC84-205ENST00000528088 NOVP48745 357 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 TRIM32Q13049 653 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 IRF5Q13568 498 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 PRPF38AQ8NAV1 312 aaKnown RBP12.83□□□□□ -0.36
CCDC84-205ENST00000528088 GPRC5AQ8NFJ5 357 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 KCNB2Q92953 911 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 RNF208Q9H0X6 261 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 PORCNQ9H237 461 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 LY9Q9HBG7 655 aa12.83□□□□□ -0.36
CCDC84-205ENST00000528088 ZBED4O75132 1171 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 SLC16A2P36021 539 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 ERVK-9P63128 1117 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 ERVK-24P63145 666 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 CCNA1P78396 465 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
CCDC84-205ENST00000528088 Q6ZUG5 572 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 IGDCC4Q8TDY8 1250 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 UPF3BQ9BZI7 483 aaKnown RBP12.82□□□□□ -0.36
CCDC84-205ENST00000528088 SENP2Q9HC62 589 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 KIAA1468Q9P260 1216 aa12.82□□□□□ -0.36
CCDC84-205ENST00000528088 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms