RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 H3BS24 57 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
SVIP-202ENST00000525670 PDE4BQ07343 736 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 DIEXFQ68CQ4 756 aaKnown RBP7.06□□□□□ -1.28
SVIP-202ENST00000525670 CDH24Q86UP0 819 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 MCATQ8IVS2 390 aaKnown RBP7.06□□□□□ -1.28
SVIP-202ENST00000525670 LTV1Q96GA3 475 aaPredicted RBP7.06□□□□□ -1.28
SVIP-202ENST00000525670 TMEM87BQ96K49 555 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 OVOS2A0A0J9YW53 1432 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 OVOS2Q6IE36 1432 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 USP54Q70EL1 1684 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 CAMTA1Q9Y6Y1 1673 aa7.06□□□□□ -1.28
SVIP-202ENST00000525670 GCP02774 474 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 RRS1Q15050 365 aaKnown RBP7.05□□□□□ -1.28
SVIP-202ENST00000525670 TMC4Q7Z404 712 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 CCDC84Q86UT8 332 aaPredicted RBP7.05□□□□□ -1.28
SVIP-202ENST00000525670 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 JARID2Q92833 1246 aaPredicted RBP7.05□□□□□ -1.28
SVIP-202ENST00000525670 UBE2FQ969M7 185 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 ADAM30Q9UKF2 790 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 TLR6Q9Y2C9 796 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 USP31Q70CQ4 1352 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 NINLQ9Y2I6 1382 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 RGPD2P0DJD1 1756 aa7.05□□□□□ -1.28
SVIP-202ENST00000525670 PEAK1Q9H792 1746 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 ANKRD26Q9UPS8 1709 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 TTC21AQ8NDW8 1320 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 ARID1BQ8NFD5 2236 aaPredicted RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 WNK3Q9BYP7 1800 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 LRRC10BA6NIK2 292 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 CTSHP09668 335 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 GDNFP39905 211 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 ETV3P41162 512 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 TNK2Q07912 1038 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 PKN1Q16512 942 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 DNAJC14Q6Y2X3 702 aaPredicted RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 UNC5CLQ8IV45 518 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 PHC3Q8NDX5 983 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 PIWIL2Q8TC59 973 aaKnown RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 CCDC120Q96HB5 630 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 PANK3Q9H999 370 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 ZSWIM5Q9P217 1185 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 TRPC5Q9UL62 973 aaPredicted RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 COL18A1P39060 1754 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 CCDC7Q96M83 1385 aa7.04□□□□□ -1.28
SVIP-202ENST00000525670 COL5A2P05997 1499 aaPredicted RBP7.04□□□□□ -1.28
SVIP-202ENST00000525670 WASHC2AQ641Q2 1341 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 PPM1GO15355 546 aaPredicted RBP7.03□□□□□ -1.28
SVIP-202ENST00000525670 EVA1CP58658 441 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 MESP2Q0VG99 397 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 ZNF124Q15973 351 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 FYB2Q5VWT5 728 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
SVIP-202ENST00000525670 COG3Q96JB2 828 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 FAM84AQ96KN4 292 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 SLC38A3Q99624 504 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 DPH2Q9BQC3 489 aaPredicted RBP7.03□□□□□ -1.28
SVIP-202ENST00000525670 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.03□□□□□ -1.28
SVIP-202ENST00000525670 CEP131Q9UPN4 1083 aa7.03□□□□□ -1.28
SVIP-202ENST00000525670 DBX1A6NMT0 343 aa7.02□□□□□ -1.29
SVIP-202ENST00000525670 GLI1P08151 1106 aa7.02□□□□□ -1.29
SVIP-202ENST00000525670 RBM6P78332 1123 aaKnown RBP7.02□□□□□ -1.29
SVIP-202ENST00000525670 CC2D1BQ5T0F9 858 aaKnown RBP7.02□□□□□ -1.29
SVIP-202ENST00000525670 DNAJB8Q8NHS0 232 aa7.02□□□□□ -1.29
SVIP-202ENST00000525670 KIRREL1Q96J84 757 aa7.02□□□□□ -1.29
SVIP-202ENST00000525670 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
SVIP-202ENST00000525670 LRRC37A3O60309 1634 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 THSD7AQ9UPZ6 1657 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 BRD4O60885 1362 aaPredicted RBP7.01□□□□□ -1.29
SVIP-202ENST00000525670 CPDO75976 1380 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.01□□□□□ -1.29
SVIP-202ENST00000525670 FYB1O15117 783 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 MLANAQ16655 118 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 TOM1L2Q6ZVM7 507 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 TMPRSS7Q7RTY8 843 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 FBXO33Q7Z6M2 555 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 USHBP1Q8N6Y0 703 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 BHLHE22Q8NFJ8 381 aaPredicted RBP7.01□□□□□ -1.29
SVIP-202ENST00000525670 LIN37Q96GY3 246 aaPredicted RBP7.01□□□□□ -1.29
SVIP-202ENST00000525670 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 ALPK1Q96QP1 1244 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
SVIP-202ENST00000525670 MAP2P11137 1827 aaKnown RBP7□□□□□ -1.29
SVIP-202ENST00000525670 FAM221AA4D161 298 aa7□□□□□ -1.29
SVIP-202ENST00000525670 CILPO75339 1184 aa7□□□□□ -1.29
SVIP-202ENST00000525670 AMPHP49418 695 aa7□□□□□ -1.29
SVIP-202ENST00000525670 LMNB2Q03252 620 aa7□□□□□ -1.29
SVIP-202ENST00000525670 CAMK2GQ13555 558 aaPredicted RBP7□□□□□ -1.29
SVIP-202ENST00000525670 VPS72Q15906 364 aa7□□□□□ -1.29
SVIP-202ENST00000525670 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
SVIP-202ENST00000525670 ARHGEF25Q86VW2 580 aa7□□□□□ -1.29
SVIP-202ENST00000525670 KCNH5Q8NCM2 988 aa7□□□□□ -1.29
SVIP-202ENST00000525670 CRELD1Q96HD1 420 aa7□□□□□ -1.29
SVIP-202ENST00000525670 CORINQ9Y5Q5 1042 aa7□□□□□ -1.29
SVIP-202ENST00000525670 CGNL1Q0VF96 1302 aa7□□□□□ -1.29
SVIP-202ENST00000525670 SPATA31A5Q5VU36 1347 aa7□□□□□ -1.29
SVIP-202ENST00000525670 SPATA31A7Q8IWB4 1347 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms