RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ABCG4Q9H172 646 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 AS3MTQ9HBK9 375 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-216ENST00000523088 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-216ENST00000523088 STIM2Q9P246 746 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-216ENST00000523088 HDAC6Q9UBN7 1215 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 POLLQ9UGP5 575 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 CNOT7Q9UIV1 285 aaKnown RBP8.46□□□□□ -1.06
HDAC3-216ENST00000523088 LEMD3Q9Y2U8 911 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
HDAC3-216ENST00000523088 SPDYE4A6NLX3 237 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 YDJCA8MPS7 323 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 EIF3FO00303 357 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 CA12O43570 354 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 ORC4O43929 436 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 TBC1D12O60347 775 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 RTN2O75298 545 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 TCEA3O75764 348 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 IGKV5-2P06315 115 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 RLBP1P12271 317 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 IDEP14735 1019 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 RAB27AP51159 221 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 MPP3Q13368 585 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 ZRSR1Q15695 479 aaKnown RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 TMEM95Q3KNT9 176 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 RRP12Q5JTH9 1297 aaKnown RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 SH2D4BQ5SQS7 431 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 IRGCQ6NXR0 463 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 UBE3BQ7Z3V4 1068 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 MICALL2Q8IY33 904 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 ARL10Q8N8L6 244 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 GBP7Q8N8V2 638 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 TTLL11Q8NHH1 800 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 MRFAP1L1Q96HT8 127 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 C8orf76Q96K31 380 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 MPHOSPH8Q99549 860 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 MMADHCQ9H3L0 296 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 DBNDD1Q9H9R9 158 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 ZNF446Q9NWS9 450 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 RGL1Q9NZL6 768 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 FAM184BQ9ULE4 1060 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 GNEQ9Y223 722 aaKnown RBP8.45□□□□□ -1.06
HDAC3-216ENST00000523088 A0A1B0GUL6 1792 aa8.45□□□□□ -1.06
HDAC3-216ENST00000523088 A0A1B0GUA9 196 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 FAM170AA1A519 330 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 PSMD14O00487 310 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TBX3O15119 743 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TTI1O43156 1089 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 ALDH1L1O75891 902 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 IVLP07476 585 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 PYGBP11216 843 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 ZFXP17010 805 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 RPL13P26373 211 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TCF7P36402 384 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 MATR3P43243 847 aaKnown RBP eCLIP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TNNI2P48788 182 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 CTCFP49711 727 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TUBA1BP68363 451 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 PTPN14Q15678 1187 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 CWF19L2Q2TBE0 894 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 RABL6Q3YEC7 729 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 CFAP58Q5T655 872 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TTC39CQ8N584 583 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 GSDMBQ8TAX9 411 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 BRSK1Q8TDC3 778 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 ZNF75CPQ92670 426 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TBC1D20Q96BZ9 403 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 DCPSQ96C86 337 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 PDLIM2Q96JY6 352 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TMEM87BQ96K49 555 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 C2orf49Q9BVC5 232 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 SRRTQ9BXP5 876 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 COA1Q9GZY4 146 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 MRPL46Q9H2W6 279 aaKnown RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 DISC1Q9NRI5 854 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TBK1Q9UHD2 729 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 FBXO2Q9UK22 296 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-216ENST00000523088 CROTQ9UKG9 612 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 PRKAB1Q9Y478 270 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 TLL2Q9Y6L7 1015 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 ECM29Q5VYK3 1845 aa8.44□□□□□ -1.06
HDAC3-216ENST00000523088 USP17L3A6NCW0 530 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 USP17L4A6NCW7 530 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 DDX11L8A8MPP1 907 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 M0QX08 132 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 RIMBP2O15034 1052 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 FGFR1OPO95684 399 aaKnown RBP8.43□□□□□ -1.06
HDAC3-216ENST00000523088 CSF1RP07333 972 aa8.43□□□□□ -1.06
HDAC3-216ENST00000523088 IDO1P14902 403 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms