RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SYDE2Q5VT97 1194 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 SPICE1Q8N0Z3 855 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 PSTPIP2Q9H939 334 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 ARHGEF10LQ9HCE6 1279 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 SMTNL1A8MU46 457 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 FZD9O00144 591 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 MSNP26038 577 aaKnown RBP19.1■□□□□ 0.65
SREK1-212ENST00000522912 MMP14P50281 582 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 MRPL12P52815 198 aaKnown RBP19.1■□□□□ 0.65
SREK1-212ENST00000522912 KARSQ15046 597 aaKnown RBP19.1■□□□□ 0.65
SREK1-212ENST00000522912 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.1■□□□□ 0.65
SREK1-212ENST00000522912 PCDHA1Q9Y5I3 950 aa19.1■□□□□ 0.65
SREK1-212ENST00000522912 ATAD5Q96QE3 1844 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 CAP2P40123 477 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 DPYDQ12882 1025 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 ORC2Q13416 577 aaPredicted RBP19.09■□□□□ 0.65
SREK1-212ENST00000522912 RASA3Q14644 834 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 TRIML1Q8N9V2 468 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 STAMQ92783 540 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 CCDC34Q96HJ3 373 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 MTRQ99707 1265 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 PYM1Q9BRP8 204 aaKnown RBP19.09■□□□□ 0.65
SREK1-212ENST00000522912 HSD3B7Q9H2F3 369 aa19.09■□□□□ 0.65
SREK1-212ENST00000522912 TTC12Q9H892 705 aaPredicted RBP19.09■□□□□ 0.65
SREK1-212ENST00000522912 SMC2O95347 1197 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 CDC25BP30305 580 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 TNNI2P48788 182 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 SAMD7Q7Z3H4 446 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 MICALL2Q8IY33 904 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 MRFAP1L1Q96HT8 127 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 GJA3Q9Y6H8 435 aa19.08■□□□□ 0.65
SREK1-212ENST00000522912 SMCHD1A6NHR9 2005 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 TDP2O95551 362 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 TXLNAP40222 546 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 IKQ13123 557 aaPredicted RBP19.08■□□□□ 0.64
SREK1-212ENST00000522912 DPF2Q92785 391 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 TEPSINQ96N21 525 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 CCSER1Q9C0I3 900 aa19.08■□□□□ 0.64
SREK1-212ENST00000522912 ASTN2O75129 1339 aaPredicted RBP19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L15C9J2P7 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L13C9JLJ4 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L11C9JVI0 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L18D6R9N7 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L22D6RA61 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L17D6RBQ6 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L19D6RCP7 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L20D6RJB6 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 SLC37A4O43826 429 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 MYL5Q02045 173 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L24Q0WX57 530 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 DRC7Q8IY82 874 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 MLKLQ8NB16 471 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 MTMR9Q96QG7 549 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 DISC1Q9NRI5 854 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 NRBP1Q9UHY1 535 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 CNOT7Q9UIV1 285 aaKnown RBP19.07■□□□□ 0.64
SREK1-212ENST00000522912 GOLGA6L6A8MZA4 724 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 NAALADL2Q58DX5 795 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 AMNQ9BXJ7 453 aa19.07■□□□□ 0.64
SREK1-212ENST00000522912 PHF20L1A8MW92 1017 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
SREK1-212ENST00000522912 UBA7P41226 1012 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 STAT6P42226 847 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 TBC1D10BQ4KMP7 808 aaPredicted RBP19.06■□□□□ 0.64
SREK1-212ENST00000522912 FBXO11Q86XK2 927 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 AK8Q96MA6 479 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 GLT8D2Q9H1C3 349 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 BLZF1Q9H2G9 400 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 KCNF1Q9H3M0 494 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 GOPCQ9HD26 462 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 PRR12Q9ULL5 1215 aa19.06■□□□□ 0.64
SREK1-212ENST00000522912 ZNF541Q9H0D2 1346 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 TAL1P17542 331 aaPredicted RBP19.05■□□□□ 0.64
SREK1-212ENST00000522912 TECP42680 631 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 FMR1Q06787 632 aaKnown RBP eCLIP19.05■□□□□ 0.647e-11■■■■■ 47.5
SREK1-212ENST00000522912 CUL4BQ13620 913 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 CALCRLQ16602 461 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 FAM83BQ5T0W9 1011 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 RRAGBQ5VZM2 374 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
SREK1-212ENST00000522912 LRRC15Q8TF66 581 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 GSDMAQ96QA5 445 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 GLIS2Q9BZE0 524 aaPredicted RBP19.05■□□□□ 0.64
SREK1-212ENST00000522912 MEIS2O14770 477 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
SREK1-212ENST00000522912 PTGS1P23219 599 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 TPM4P67936 248 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 PPP4R3AQ6IN85 833 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 CCDC186Q7Z3E2 898 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 IGSF22Q8N9C0 903 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 PLIN2Q99541 437 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 VCPKMTQ9H867 229 aa19.05■□□□□ 0.64
SREK1-212ENST00000522912 ZNF500O60304 480 aaPredicted RBP19.04■□□□□ 0.64
SREK1-212ENST00000522912 ATP1A3P13637 1013 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 TXKP42681 527 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 STAT2P52630 851 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms