RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 PPARAQ07869 468 aa18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 FSCN1Q16658 493 aaKnown RBP18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 FAM160B2Q86V87 743 aa18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 STAG1Q8WVM7 1258 aa18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 HIPK3Q9H422 1215 aa18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MSRAQ9UJ68 235 aa18.08■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ASTN1O14525 1302 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TSPY2A6NKD2 308 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 IGFBP4P22692 258 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CCL23P55773 120 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CCDC85BQ15834 202 aaPredicted RBP18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 NSMFQ6X4W1 530 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 FBXO16Q8IX29 292 aaPredicted RBP18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 GMCL1Q96IK5 515 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MTIF3Q9H2K0 278 aaKnown RBP18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 IL23AQ9NPF7 189 aa18.07■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MYH4Q9Y623 1939 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ZNF536O15090 1300 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 UMODL1Q5DID0 1318 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ZEB2O60315 1214 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 FGBP02675 491 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 SMPD1P17405 629 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PSMC6P62333 389 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RAB30Q15771 203 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CCDC96Q2M329 555 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TKFCQ3LXA3 575 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RASIP1Q5U651 963 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RASGRP2Q7LDG7 609 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PDGFCQ9NRA1 345 aa18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CXXC1Q9P0U4 656 aaPredicted RBP18.06■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ERC2O15083 957 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 NMT2O60551 498 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CABYRO75952 493 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CD4P01730 458 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CTDSPL2Q05D32 466 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MUM1L1Q5H9M0 696 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 HERVK_113Q902F9 699 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CCPG1Q9ULG6 757 aa18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MCM3APO60318 1980 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PPP4R3BQ5MIZ7 849 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 OTUD7AQ8TE49 926 aaPredicted RBP18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PURBQ96QR8 312 aaKnown RBP18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 INCENPQ9NQS7 918 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 THEGQ9P2T0 379 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PRR12Q9ULL5 1215 aa18.04■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TTC41PQ6P2S7 1318 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TNFRSF10AO00220 468 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 B4GALT4O60513 344 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RANBP6O60518 1105 aaKnown RBP18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ZMYM1Q5SVZ6 1142 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TMEM63BQ5T3F8 832 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RCSD1Q6JBY9 416 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 KIAA1211Q6ZU35 1233 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 MICALL1Q8N3F8 863 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TOMM22Q9NS69 142 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 CYP39A1Q9NYL5 469 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 YBX2Q9Y2T7 364 aaKnown RBP18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 TTC28Q96AY4 2481 aa18.03■□□□□ 0.48
CSGALNACT1-204ENST00000517494 GRIN2DO15399 1336 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 RABGGTBP53611 331 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 NKX3-2P78367 333 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 ADGRE1Q14246 886 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 AKNAD1Q5T1N1 836 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 IQSEC1Q6DN90 963 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 SLC43A3Q8NBI5 491 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 PI4K2BQ8TCG2 481 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 NOC4LQ9BVI4 516 aaKnown RBP18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 IL17RBQ9NRM6 502 aa18.02■□□□□ 0.48
CSGALNACT1-204ENST00000517494 SLC16A2P36021 539 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 PPP2R2DQ66LE6 453 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TAPT1Q6NXT6 567 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SCLYQ96I15 445 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 WNT8AQ9H1J5 351 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 SLC4A7Q9Y6M7 1214 aa18.01■□□□□ 0.47
CSGALNACT1-204ENST00000517494 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 PLA2G6O60733 806 aa18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ICAM1P05362 532 aa18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 MYL3P08590 195 aa18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 BAATQ14032 418 aaPredicted RBP18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 RRP12Q5JTH9 1297 aaKnown RBP18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ATXN2LQ8WWM7 1075 aaKnown RBP18■□□□□ 0.47
CSGALNACT1-204ENST00000517494 FRMPD2Q68DX3 1309 aaPredicted RBP17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 CYP2C9P11712 490 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 MYOGP15173 224 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 MX1P20591 662 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 FAM47CQ5HY64 1035 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
CSGALNACT1-204ENST00000517494 ADAMTS19Q8TE59 1207 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms