RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 AMNQ9BXJ7 453 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 VPS16Q9H269 839 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 IFT88Q13099 833 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 PNMA1Q8ND90 353 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 GABPB2Q8TAK5 448 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 DEPTORQ8TB45 409 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 PSTPIP2Q9H939 334 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.25
PCDHGA6-201ENST00000517434 XPOTO43592 962 aaKnown RBP13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 GAS8O95995 478 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 RXRAP19793 462 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 HOXD10P28358 340 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 MAGEA1P43355 309 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM160B2Q86V87 743 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 SERPINB13Q9UIV8 391 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 PPP2R2CQ9Y2T4 447 aa13.46□□□□□ -0.26
PCDHGA6-201ENST00000517434 CTDSPL2Q05D32 466 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 GSDMBQ8TAX9 411 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 CCPG1Q9ULG6 757 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ABCD1P33897 745 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 APOBEC3FQ8IUX4 373 aaKnown RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 SLC17A8Q8NDX2 589 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 Q9H521 79 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ARHGEF37A1IGU5 675 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 SMCO2A6NFE2 343 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 RGS16O15492 202 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM193BQ96PV7 902 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 CSRNP2Q9H175 543 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ZWINTO95229 277 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ATF7P17544 494 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ODR4Q5SWX8 454 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
PCDHGA6-201ENST00000517434 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 DBNDD1Q9H9R9 158 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 RNF17Q9BXT8 1623 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 E9PCH4 1651 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TESPA1A2RU30 521 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 HSPA1LP34931 641 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 BIRC2Q13490 618 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 LIN9Q5TKA1 542 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 DENND2CQ68D51 928 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM173BQ6P4H8 233 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 PLEKHF1Q96S99 279 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 CDC23Q9UJX2 597 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 SSH2Q76I76 1423 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 STMN1P16949 149 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TFDP1Q14186 410 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 KLHL7Q8IXQ5 586 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 NACA2Q9H009 215 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 RAD17O75943 681 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TTLL1O95922 423 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 ASNSP08243 561 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 STX2P32856 288 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 CLCN6P51797 869 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TSC22D3Q99576 134 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 NOC4LQ9BVI4 516 aaKnown RBP13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
PCDHGA6-201ENST00000517434 TMEM232C9JQI7 657 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 KLRF2D3W0D1 207 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 CEP104O60308 925 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 TROVE2P10155 538 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 TTC16Q8NEE8 873 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 FAM227BQ96M60 508 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 ZNF202O95125 648 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 YARSP54577 528 aaKnown RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 IRX5P78411 483 aaPredicted RBP13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 INF2Q27J81 1249 aa13.43□□□□□ -0.26
PCDHGA6-201ENST00000517434 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms