RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 RARBP10826 455 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 LRRC41Q15345 812 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 MAD2L2Q9UI95 211 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 ALPK3Q96L96 1907 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 ERICH2A1L162 156 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 TROAPQ12815 778 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 GRM4Q14833 912 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 WTAPQ15007 396 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 SART3Q15020 963 aaKnown RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 SLC35G1Q2M3R5 365 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 TMEM67Q5HYA8 995 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 FAM184BQ9ULE4 1060 aa13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 DDX49Q9Y6V7 483 aaKnown RBP13.56□□□□□ -0.24
SH3RF1-205ENST00000511421 ASB14A6NK59 587 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 ADCY6O43306 1168 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 QRICH1Q2TAL8 776 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 MORC4Q8TE76 937 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 MTMR8Q96EF0 704 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 MTA3Q9BTC8 594 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 LY9Q9HBG7 655 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 VAT1LQ9HCJ6 419 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 XPNPEP3Q9NQH7 507 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 MCM3APO60318 1980 aa13.55□□□□□ -0.24
SH3RF1-205ENST00000511421 PRC1O43663 620 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 ADAMTS4O75173 837 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 PGK1P00558 417 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 RPS6P62753 249 aaKnown RBP13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 CCDC144BQ3MJ40 725 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 USH1GQ495M9 461 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 ERICH6BQ5W0A0 696 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 CASC1Q6TDU7 716 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 SLC30A10Q6XR72 485 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 RNF207Q6ZRF8 634 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
SH3RF1-205ENST00000511421 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 MCM5P33992 734 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 PPP4R2Q9NY27 417 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 LCTP09848 1927 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 ABCB11O95342 1321 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 SH2B2O14492 632 aaPredicted RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 DHX16O60231 1041 aaKnown RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 CALML3P27482 149 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 ADCYAP1R1P41586 468 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 ALDH5A1P51649 535 aaPredicted RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 RNF180Q86T96 592 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 KLHDC9Q8NEP7 349 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 TBC1D5Q92609 795 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 MAF1Q9H063 256 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 PHF24Q9UPV7 400 aa13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
SH3RF1-205ENST00000511421 LOC102724159A0A0B4J2E5 919 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 CYTH3O43739 400 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 IRX5P78411 483 aaPredicted RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 PWP2Q15269 919 aaKnown RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 ZNF654Q8IZM8 581 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 MAP3K14Q99558 947 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 PRO3102Q9H379 93 aa13.52□□□□□ -0.25
SH3RF1-205ENST00000511421 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 ZBTB5O15062 677 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 DDAH1O94760 285 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 LIFRP42702 1097 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 GJA9P57773 515 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 NKX3-2P78367 333 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 SNX17Q15036 470 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 HABP4Q5JVS0 413 aaKnown RBP13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 SLC39A5Q6ZMH5 540 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 EEPD1Q7L9B9 569 aa13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 FBXO16Q8IX29 292 aaPredicted RBP13.51□□□□□ -0.25
SH3RF1-205ENST00000511421 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms