RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 PLEKHN1Q494U1 663 aaPredicted RBP8.67□□□□□ -1.02
NUP54-209ENST00000510569 LDHDQ86WU2 507 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 IGDCC3Q8IVU1 814 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 PTCHD1Q96NR3 888 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 KCNC2Q96PR1 638 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 PARD6AQ9NPB6 346 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 DIS3Q9Y2L1 958 aaKnown RBP8.67□□□□□ -1.02
NUP54-209ENST00000510569 PCDHA5Q9Y5H7 936 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 CD3EP07766 207 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 MAPKAPK2P49137 400 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 RCSD1Q6JBY9 416 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 JAMLQ86YT9 394 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 TMEFF1Q8IYR6 380 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 PANK1Q8TE04 598 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 ZDHHC15Q96MV8 337 aa8.66□□□□□ -1.02
NUP54-209ENST00000510569 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.66□□□□□ -1.02
NUP54-209ENST00000510569 HOXA5P20719 270 aa8.65□□□□□ -1.02
NUP54-209ENST00000510569 GNPTABQ3T906 1256 aa8.65□□□□□ -1.02
NUP54-209ENST00000510569 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.02
NUP54-209ENST00000510569 SHDQ96IW2 340 aa8.65□□□□□ -1.02
NUP54-209ENST00000510569 IRS2Q9Y4H2 1338 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 TRIM13O60858 407 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 DBHP09172 617 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 FAM129CQ86XR2 697 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 KLHL6Q8WZ60 621 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 GBP3Q9H0R5 595 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
NUP54-209ENST00000510569 KIAA1522Q9P206 1035 aaPredicted RBP8.64□□□□□ -1.03
NUP54-209ENST00000510569 TBC1D8O95759 1140 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 CYBBP04839 570 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 EPHX1P07099 455 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 AFF3P51826 1226 aaKnown RBP8.63□□□□□ -1.03
NUP54-209ENST00000510569 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
NUP54-209ENST00000510569 ZC3H14Q6PJT7 736 aaKnown RBP8.63□□□□□ -1.03
NUP54-209ENST00000510569 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
NUP54-209ENST00000510569 MCMBPQ9BTE3 642 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
NUP54-209ENST00000510569 A0A1W2PQ27 194 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 A0A1W2PQ64 194 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 A0A1W2PQC6 194 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 A0A1W2PQD8 194 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 AURKAO14965 403 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 BMP7P18075 431 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 IGFBP6P24592 240 aaPredicted RBP8.62□□□□□ -1.03
NUP54-209ENST00000510569 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
NUP54-209ENST00000510569 CASP7P55210 303 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 PPP2R5DQ14738 602 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 EEF1DP3Q658K8 133 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 CNKSR3Q6P9H4 555 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 PAQR3Q6TCH7 311 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 ADCY4Q8NFM4 1077 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 C20orf173Q96LM9 149 aa8.62□□□□□ -1.03
NUP54-209ENST00000510569 FBLN1P23142 703 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 L1CAMP32004 1257 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 CTSWP56202 376 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 GRB10Q13322 594 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 C9orf131Q5VYM1 1079 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 HOMEZQ8IX15 550 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 RCC1LQ96I51 464 aaKnown RBP8.61□□□□□ -1.03
NUP54-209ENST00000510569 TGIF2Q9GZN2 237 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 ZCCHC4Q9H5U6 513 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 CGGBP1Q9UFW8 167 aaPredicted RBP8.61□□□□□ -1.03
NUP54-209ENST00000510569 SUSD2Q9UGT4 822 aa8.61□□□□□ -1.03
NUP54-209ENST00000510569 NCANO14594 1321 aa8.6□□□□□ -1.03
NUP54-209ENST00000510569 PPM1BO75688 479 aa8.6□□□□□ -1.03
NUP54-209ENST00000510569 ZNF200P98182 395 aaPredicted RBP8.6□□□□□ -1.03
NUP54-209ENST00000510569 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
NUP54-209ENST00000510569 RGS22Q8NE09 1264 aa8.6□□□□□ -1.03
NUP54-209ENST00000510569 A0A0G2JLL6 359 aaPredicted RBP8.59□□□□□ -1.03
NUP54-209ENST00000510569 UNCXA6NJT0 531 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 STXBP3O00186 592 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
NUP54-209ENST00000510569 CAP1Q01518 475 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 BICRALQ6AI39 1079 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 ZNF513Q8N8E2 541 aaPredicted RBP8.59□□□□□ -1.03
NUP54-209ENST00000510569 FGD4Q96M96 766 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 STRIP2Q9ULQ0 834 aa8.59□□□□□ -1.03
NUP54-209ENST00000510569 GLI4P10075 376 aa8.58□□□□□ -1.04
NUP54-209ENST00000510569 NCKAP1LP55160 1127 aa8.58□□□□□ -1.04
NUP54-209ENST00000510569 FAM169BQ8N8A8 192 aa8.58□□□□□ -1.04
NUP54-209ENST00000510569 BACE2Q9Y5Z0 518 aa8.58□□□□□ -1.04
NUP54-209ENST00000510569 A0A1W2PQJ5 194 aa8.57□□□□□ -1.04
NUP54-209ENST00000510569 PRRG2O14669 202 aa8.57□□□□□ -1.04
NUP54-209ENST00000510569 AMPD2Q01433 879 aa8.57□□□□□ -1.04
NUP54-209ENST00000510569 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
NUP54-209ENST00000510569 HCFC2Q9Y5Z7 792 aa8.57□□□□□ -1.04
NUP54-209ENST00000510569 B8ZZF3 427 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 VAMP4O75379 141 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 PFKLP17858 780 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 TACR1P25103 407 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 PPP2R5EQ16537 467 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
NUP54-209ENST00000510569 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 PWWP2AQ96N64 755 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
NUP54-209ENST00000510569 XYLT2Q9H1B5 865 aa8.56□□□□□ -1.04
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