RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 PCDHB3Q9Y5E6 796 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 RBM8AQ9Y5S9 174 aaKnown RBP8.56□□□□□ -1.04
TRIO-213ENST00000509354 LRRC37A2A6NM11 1700 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 PLIN4Q96Q06 1357 aa8.56□□□□□ -1.04
TRIO-213ENST00000509354 IGKV6D-41A0A0C4DH26 115 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 SLC27A2O14975 620 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 WDR46O15213 610 aaKnown RBP8.55□□□□□ -1.04
TRIO-213ENST00000509354 FLOT1O75955 427 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 CYP2B6P20813 491 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 MAPK4P31152 587 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 CCL14Q16627 93 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 FAM47AQ5JRC9 791 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 LBX2Q6XYB7 198 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 RASGRP2Q7LDG7 609 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 PLEKHH3Q7Z736 793 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 GTF3C2Q8WUA4 911 aaPredicted RBP8.55□□□□□ -1.04
TRIO-213ENST00000509354 CHMP4CQ96CF2 233 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 CEP95Q96GE4 821 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 AGXT2Q9BYV1 514 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 NACAP1Q9BZK3 213 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 RNF208Q9H0X6 261 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 SH2D4AQ9H788 454 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
TRIO-213ENST00000509354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIO-213ENST00000509354 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 SPTLC1O15269 473 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 NMT2O60551 498 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 NR1I2O75469 434 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 NDUFB10O96000 172 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 HMGCRP04035 888 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 FDX1P10109 184 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 HSPD1P10809 573 aaKnown RBP8.54□□□□□ -1.04
TRIO-213ENST00000509354 PTPN5P54829 565 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 HAND2P61296 217 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 UBXN2AP68543 259 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 PLS1Q14651 629 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 ALX1Q15699 326 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 MORN1Q5T089 497 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
TRIO-213ENST00000509354 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 SOCS4Q8WXH5 440 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 LPAR1Q92633 364 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 USP6NLQ92738 828 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 DEFB118Q96PH6 123 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 MOV10L1Q9BXT6 1211 aaKnown RBP8.54□□□□□ -1.04
TRIO-213ENST00000509354 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIO-213ENST00000509354 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
TRIO-213ENST00000509354 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
TRIO-213ENST00000509354 GJB1P08034 283 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 CYP21A2P08686 494 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 ZKSCAN1P17029 563 aaPredicted RBP8.53□□□□□ -1.04
TRIO-213ENST00000509354 GJA8P48165 433 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 NEK4P51957 841 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 EVCP57679 992 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 CCNA1P78396 465 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 TFAP4Q01664 338 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 KRT32Q14532 448 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 COG2Q14746 738 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 ADCK5Q3MIX3 580 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
TRIO-213ENST00000509354 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 TBC1D10CQ8IV04 446 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 ZNF444Q8N0Y2 327 aaPredicted RBP8.53□□□□□ -1.04
TRIO-213ENST00000509354 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 U2AF1L4Q8WU68 220 aaKnown RBP8.53□□□□□ -1.04
TRIO-213ENST00000509354 TMX3Q96JJ7 454 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 APBA2Q99767 749 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 NUDT12Q9BQG2 462 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 SPATC1LQ9H0A9 340 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 PAK6Q9NQU5 681 aaPredicted RBP8.53□□□□□ -1.04
TRIO-213ENST00000509354 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 MTMR4Q9NYA4 1195 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 FLRT1Q9NZU1 646 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 CHMP5Q9NZZ3 219 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 CLIP2Q9UDT6 1046 aa8.53□□□□□ -1.04
TRIO-213ENST00000509354 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 F5H6K3 240 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 FGAP02671 866 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 TSPY3P0CV98 308 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 TSPY8P0CW00 308 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 ERCC3P19447 782 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 PSMA5P28066 241 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 CCND3P30281 292 aaPredicted RBP8.52□□□□□ -1.05
TRIO-213ENST00000509354 RGS2P41220 211 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 PDE4BQ07343 736 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 KLRC3Q07444 240 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 GRB14Q14449 540 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 TMEM132BQ14DG7 1078 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 RRP12Q5JTH9 1297 aaKnown RBP8.52□□□□□ -1.05
TRIO-213ENST00000509354 UBE2Q1Q7Z7E8 422 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 NCAPG2Q86XI2 1143 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 REPS2Q8NFH8 660 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 NPLOC4Q8TAT6 608 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 DIS3LQ8TF46 1054 aaKnown RBP8.52□□□□□ -1.05
TRIO-213ENST00000509354 ANAPC4Q9UJX5 808 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
TRIO-213ENST00000509354 TAF6LQ9Y6J9 622 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms