RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TUBB2AQ13885 445 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 QPCTQ16769 361 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 SWT1Q5T5J6 900 aaKnown RBP8.47□□□□□ -1.05
NEDD9-208ENST00000504387 IQCA1Q86XH1 822 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 AENQ8WTP8 325 aaKnown RBP8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TCP11Q8WWU5 503 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TMEM87BQ96K49 555 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 OSBPL9Q96SU4 736 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 TUBB2BQ9BVA1 445 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 VEZTQ9HBM0 779 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 DONSONQ9NYP3 566 aa8.47□□□□□ -1.05
NEDD9-208ENST00000504387 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 TNKSO95271 1327 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 FAM237AA0A1B0GTK4 181 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 CHRM1P11229 460 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 GSCP56915 257 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 MKRN4PQ13434 485 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 IL17AQ16552 155 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 B4GALNT4Q76KP1 1039 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 NLRP14Q86W24 1093 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 MDM1Q8TC05 714 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 UBLCP1Q8WVY7 318 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC51Q96ER9 411 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 AP1M1Q9BXS5 423 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-208ENST00000504387 CPVLQ9H3G5 476 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 STIM2Q9P246 746 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 SNX12Q9UMY4 172 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 CACNA1FO60840 1977 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 MYH13Q9UKX3 1938 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 NWD1Q149M9 1564 aa8.46□□□□□ -1.05
NEDD9-208ENST00000504387 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 NUTM2EB1AL46 878 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 GOLGA8KD6RF30 607 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 SHOX2O60902 331 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 CLTAP09496 248 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 IL2RBP14784 551 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 CYP7A1P22680 504 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 MAGEA1P43355 309 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 ACCSLQ4AC99 568 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 PAPD7Q5XG87 772 aaKnown RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 HAUS3Q68CZ6 603 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 CNPY4Q8N129 248 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 MYO1AQ9UBC5 1043 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 LIMA1Q9UHB6 759 aaKnown RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 RIPOR2Q9Y4F9 1068 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 DCDC2CA8MYV0 355 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 BUB1BO60566 1050 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 TUBBP07437 444 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 XBP1P17861 261 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 FNTAP49354 379 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 NEDD9Q14511 834 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 DYMQ7RTS9 669 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 LRP10Q7Z4F1 713 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 MYCBPAPQ8TBZ2 947 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 NACAP1Q9BZK3 213 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 CCDC113Q9H0I3 377 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 DDX20Q9UHI6 824 aaKnown RBP8.46□□□□□ -1.06
NEDD9-208ENST00000504387 PLAAQ9Y263 795 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 L3MBTL1Q9Y468 752 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 PCDHA13Q9Y5I0 950 aa8.46□□□□□ -1.06
NEDD9-208ENST00000504387 CCDC196A0A1B0GTZ2 297 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 DNM1LO00429 736 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 RAD21O60216 631 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 USO1O60763 962 aaKnown RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 LLGL1Q15334 1064 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 PPP1R7Q15435 360 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 HIBCHQ6NVY1 386 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 SPATA20Q8TB22 786 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 AATFQ9NY61 560 aaKnown RBP eCLIP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 RWDD2AQ9UIY3 292 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 CLGNO14967 610 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 CHUKO15111 745 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 PPP1R37O75864 691 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 UBA7P41226 1012 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 ASIC1P78348 528 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 LRRC41Q15345 812 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 FAM133BQ5BKY9 247 aaKnown RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 ANKRD40Q6AI12 368 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 CACNA2D4Q7Z3S7 1137 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 CPLX4Q7Z7G2 160 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 AMOTL1Q8IY63 956 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 CNOT6LQ96LI5 555 aaKnown RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 SH3GL2Q99962 352 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 LBHD1Q9BQE6 289 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-208ENST00000504387 LRRC4CQ9HCJ2 640 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 EXOC1Q9NV70 894 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 TBC1D7Q9P0N9 293 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 ZBTB1Q9Y2K1 713 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 MEGF6O75095 1541 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 HEG1Q9ULI3 1381 aa8.45□□□□□ -1.06
NEDD9-208ENST00000504387 MYH15Q9Y2K3 1946 aa8.44□□□□□ -1.06
NEDD9-208ENST00000504387 GOLGA6L10A6NI86 522 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms