RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 MOXD2PA6NHM9 499 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 TTLL1O95922 423 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 PGK1P00558 417 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 CHGBP05060 677 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 CLTBP09497 229 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 RAG1P15918 1043 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 OAZ1P54368 228 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 SHHQ15465 462 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 MAMDC4Q6UXC1 1216 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 CHST13Q8NET6 341 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 OSBP2Q969R2 916 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 TMEM39AQ9NV64 488 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 FRMPD3Q5JV73 1810 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 SMAPO00193 183 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 ZNF865P0CJ78 1059 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 NUP88Q99567 741 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 ABHD16BQ9H3Z7 469 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-211ENST00000502404 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 A0A1W2PQ45 241 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 A0A1W2PQY0 241 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 RCCD1A6NED2 376 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 ACLYP53396 1101 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 TMUB1Q9BVT8 246 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 NAPBQ9H115 298 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
UBE2D3-211ENST00000502404 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 ELP1O95163 1332 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 ADAMTS4O75173 837 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 BMP3P12645 472 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 DNAJB2P25686 324 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 FPGSQ05932 587 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 KCNA10Q16322 511 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 CEP95Q96GE4 821 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 SEPT9Q9UHD8 586 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-211ENST00000502404 MYH7P12883 1935 aa13.21□□□□□ -0.3
UBE2D3-211ENST00000502404 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 PRDM1O75626 825 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 SNAI1O95863 264 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 CLCN1P35523 988 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 STAT2P52630 851 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 TFAP4Q01664 338 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 C9orf50Q5SZB4 431 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 RIPK3Q9Y572 518 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 SMCHD1A6NHR9 2005 aa13.2□□□□□ -0.3
UBE2D3-211ENST00000502404 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
UBE2D3-211ENST00000502404 COL6A3P12111 3177 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms