RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 METTL16Q86W50 562 aaKnown RBP6.05□□□□□ -1.44
CBX3-208ENST00000497498 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 NLGN2Q8NFZ4 835 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 RASGRP4Q8TDF6 673 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 GINM1Q9NU53 330 aa6.05□□□□□ -1.44
CBX3-208ENST00000497498 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
CBX3-208ENST00000497498 A0A1W2PQ27 194 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 A0A1W2PQ64 194 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 A0A1W2PQC6 194 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 A0A1W2PQD8 194 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 CYBBP04839 570 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 IGFBP6P24592 240 aaPredicted RBP6.04□□□□□ -1.44
CBX3-208ENST00000497498 CORO7P57737 925 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 POU4F1Q01851 419 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 TCEAL1Q15170 157 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 PAQR3Q6TCH7 311 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 C19orf47Q8N9M1 422 aaKnown RBP6.04□□□□□ -1.44
CBX3-208ENST00000497498 PTCHD1Q96NR3 888 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 CRBNQ96SW2 442 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 XYLT2Q9H1B5 865 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 NOL6Q9H6R4 1146 aaKnown RBP6.04□□□□□ -1.44
CBX3-208ENST00000497498 PDLIM7Q9NR12 457 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 FAM86C1Q9NVL1 165 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
CBX3-208ENST00000497498 DBHP09172 617 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 IFNGR1P15260 489 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 GIPRP48546 466 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 ZC3H14Q6PJT7 736 aaKnown RBP6.03□□□□□ -1.44
CBX3-208ENST00000497498 CCDC81Q6ZN84 652 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 RELTQ969Z4 430 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 HAUS7Q99871 368 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 KLHL25Q9H0H3 589 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 PHAXQ9H814 394 aaKnown RBP6.03□□□□□ -1.44
CBX3-208ENST00000497498 WHRNQ9P202 907 aa6.03□□□□□ -1.44
CBX3-208ENST00000497498 BUB1BO60566 1050 aaPredicted RBP6.02□□□□□ -1.45
CBX3-208ENST00000497498 TBC1D8O95759 1140 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 CD3EP07766 207 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 FBLN1P23142 703 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 NCKAP1LP55160 1127 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
CBX3-208ENST00000497498 CAP1Q01518 475 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 RCSD1Q6JBY9 416 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 OR6P1Q8NGX9 317 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 ZDHHC15Q96MV8 337 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 PWWP2AQ96N64 755 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 RTEL1Q9NZ71 1219 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 EFR3BQ9Y2G0 817 aa6.02□□□□□ -1.45
CBX3-208ENST00000497498 A0A1W2PQH9 124 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 SASH1O94885 1247 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 L1CAMP32004 1257 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 BUD31P41223 144 aaPredicted RBP6.01□□□□□ -1.45
CBX3-208ENST00000497498 ZNF200P98182 395 aaPredicted RBP6.01□□□□□ -1.45
CBX3-208ENST00000497498 GNPTABQ3T906 1256 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 EEF1DP3Q658K8 133 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 BICRALQ6AI39 1079 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 LINC01356Q8N9X3 169 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 GPRASP2Q96D09 838 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
CBX3-208ENST00000497498 AURKAO14965 403 aa6□□□□□ -1.45
CBX3-208ENST00000497498 FOXD2O60548 495 aaPredicted RBP6□□□□□ -1.45
CBX3-208ENST00000497498 PFKLP17858 780 aa6□□□□□ -1.45
CBX3-208ENST00000497498 GJA8P48165 433 aa6□□□□□ -1.45
CBX3-208ENST00000497498 SLC7A5Q01650 507 aa6□□□□□ -1.45
CBX3-208ENST00000497498 PPP2R5DQ14738 602 aa6□□□□□ -1.45
CBX3-208ENST00000497498 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
CBX3-208ENST00000497498 VMACQ2NL98 169 aa6□□□□□ -1.45
CBX3-208ENST00000497498 HEATR6Q6AI08 1181 aaKnown RBP6□□□□□ -1.45
CBX3-208ENST00000497498 RGS22Q8NE09 1264 aa6□□□□□ -1.45
CBX3-208ENST00000497498 MCMBPQ9BTE3 642 aa6□□□□□ -1.45
CBX3-208ENST00000497498 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
CBX3-208ENST00000497498 LUC7LQ9NQ29 371 aaKnown RBP6□□□□□ -1.45
CBX3-208ENST00000497498 HCFC2Q9Y5Z7 792 aa6□□□□□ -1.45
CBX3-208ENST00000497498 A0A1W2PQJ5 194 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 OTOL1A6NHN0 477 aaPredicted RBP5.99□□□□□ -1.45
CBX3-208ENST00000497498 EPHX1P07099 455 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 NFIXQ14938 502 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 SP8Q8IXZ3 490 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 ARHGEF39Q8N4T4 335 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 TP53I13Q8NBR0 393 aaPredicted RBP5.99□□□□□ -1.45
CBX3-208ENST00000497498 ADCY4Q8NFM4 1077 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 KLHL6Q8WZ60 621 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 RCC1LQ96I51 464 aaKnown RBP5.99□□□□□ -1.45
CBX3-208ENST00000497498 GBP3Q9H0R5 595 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 PCDHB10Q9UN67 800 aa5.99□□□□□ -1.45
CBX3-208ENST00000497498 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.99□□□□□ -1.45
CBX3-208ENST00000497498 F8W031 263 aaPredicted RBP5.98□□□□□ -1.45
CBX3-208ENST00000497498 PPM1BO75688 479 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 GLI4P10075 376 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 LIMS1P48059 325 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 CASP7P55210 303 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 PRR5P85299 388 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 HDLBPQ00341 1268 aaKnown RBP5.98□□□□□ -1.45
CBX3-208ENST00000497498 GRB10Q13322 594 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 NT5DC4Q86YG4 428 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 NLGN1Q8N2Q7 840 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 CXorf38Q8TB03 319 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 FEZF2Q8TBJ5 459 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 SHDQ96IW2 340 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 RNF38Q9H0F5 515 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms