RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 HOXC12P31275 282 aa10.97□□□□□ -0.65
HMGB3P14-201ENST00000494195 RASA3Q14644 834 aa10.97□□□□□ -0.65
HMGB3P14-201ENST00000494195 GALNT18Q6P9A2 607 aa10.97□□□□□ -0.65
HMGB3P14-201ENST00000494195 CWC22Q9HCG8 908 aaKnown RBP10.97□□□□□ -0.65
HMGB3P14-201ENST00000494195 TAF6LQ9Y6J9 622 aa10.97□□□□□ -0.65
HMGB3P14-201ENST00000494195 PPP2R2AP63151 447 aa10.96□□□□□ -0.65
HMGB3P14-201ENST00000494195 NLRX1Q86UT6 975 aa10.96□□□□□ -0.65
HMGB3P14-201ENST00000494195 CCDC140Q96MF4 163 aa10.96□□□□□ -0.65
HMGB3P14-201ENST00000494195 DEPDC7Q96QD5 511 aa10.96□□□□□ -0.65
HMGB3P14-201ENST00000494195 JMJD8Q96S16 334 aa10.96□□□□□ -0.65
HMGB3P14-201ENST00000494195 CAPNS1P04632 268 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 MTERF2Q49AM1 385 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 JAMLQ86YT9 394 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 SHISA4Q96DD7 197 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 PLCD4Q9BRC7 762 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 OSBPL2Q9H1P3 480 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 SNTG2Q9NY99 539 aa10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
HMGB3P14-201ENST00000494195 TRBV23OR9-2A0A075B6M9 112 aa10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 ZNF503-AS2A6NEH8 195 aa10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 EFEMP2O95967 443 aa10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 SNRPB2P08579 225 aaKnown RBP10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 PAMP19021 973 aa10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 YBX2Q9Y2T7 364 aaKnown RBP10.94□□□□□ -0.66
HMGB3P14-201ENST00000494195 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 SCG5P05408 212 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 THBDP07204 575 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 CYP4F3Q08477 520 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 SPATC1Q76KD6 591 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 SRPK1Q96SB4 655 aaKnown RBP10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 CRTAC1Q9NQ79 661 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 GPRC5CQ9NQ84 441 aa10.93□□□□□ -0.66
HMGB3P14-201ENST00000494195 NPHP3-ACAD11A0A0J9YXS1 232 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 FAM221BA6H8Z2 402 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 PAX4O43316 350 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 CPP00450 1065 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 PLS3P13797 630 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 L1CAMP32004 1257 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 GFRA1P56159 465 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 IFRD2Q12894 506 aaPredicted RBP10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 LAPTM5Q13571 262 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 MPZL3Q6UWV2 235 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 LIN37Q96GY3 246 aaPredicted RBP10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 SPATA9Q9BWV2 254 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 SLC6A17Q9H1V8 727 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 FAM53CQ9NYF3 392 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 CLEC1BQ9P126 229 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 IMPACTQ9P2X3 320 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 ACSL6Q9UKU0 697 aa10.92□□□□□ -0.66
HMGB3P14-201ENST00000494195 ECI1P42126 302 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 GRIA2P42262 883 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 KCNJ6P48051 423 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 GALK1P51570 392 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 SF1Q15637 639 aaKnown RBP10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 NUP43Q8NFH3 380 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 NPLOC4Q8TAT6 608 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 ARHGEF4Q9NR80 690 aa10.91□□□□□ -0.66
HMGB3P14-201ENST00000494195 PNLIPP16233 465 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 PRKCAP17252 672 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 SSRP1Q08945 709 aaKnown RBP10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 KIR3DS1Q14943 382 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 CPNE8Q86YQ8 564 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 SIRT2Q8IXJ6 389 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 INTS4Q96HW7 963 aaKnown RBP10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 MMP19Q99542 508 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 LNPKQ9C0E8 428 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 PFDN2Q9UHV9 154 aa10.9□□□□□ -0.66
HMGB3P14-201ENST00000494195 A0A1W2PQ27 194 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 A0A1W2PQ64 194 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 A0A1W2PQC6 194 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 A0A1W2PQD8 194 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 CORO7P57737 925 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 NFE2L2Q16236 605 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 NLGN2Q8NFZ4 835 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 IER2Q9BTL4 223 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 RNF114Q9Y508 228 aa10.89□□□□□ -0.67
HMGB3P14-201ENST00000494195 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 MAP4K2Q12851 820 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 E4F1Q66K89 784 aaPredicted RBP10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 IRF2BP1Q8IU81 584 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 TMEM145Q8NBT3 493 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 KREMEN2Q8NCW0 462 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
HMGB3P14-201ENST00000494195 DIAPH1O60610 1272 aaKnown RBP10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 FGFR1P11362 822 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 ARL4AP40617 200 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 CYP4F8P98187 520 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 MVKQ03426 396 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 PRSS53Q2L4Q9 553 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 SLC35F1Q5T1Q4 408 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 ACBD5Q5T8D3 534 aaPredicted RBP10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 IQCEQ6IPM2 695 aa10.87□□□□□ -0.67
HMGB3P14-201ENST00000494195 C1orf159Q96HA4 380 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms