RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CWC22Q9HCG8 908 aaKnown RBP14.36□□□□□ -0.11
SNX17-208ENST00000493711 SH3GLB2Q9NR46 395 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 ORC3Q9UBD5 711 aaPredicted RBP14.36□□□□□ -0.11
SNX17-208ENST00000493711 ICAM1P05362 532 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 SCG2P13521 617 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 TAF1CQ15572 869 aaPredicted RBP14.35□□□□□ -0.11
SNX17-208ENST00000493711 PFKFB3Q16875 520 aaPredicted RBP14.35□□□□□ -0.11
SNX17-208ENST00000493711 PPP1R18Q6NYC8 613 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 CMTR1Q8N1G2 835 aaKnown RBP14.35□□□□□ -0.11
SNX17-208ENST00000493711 PHKBQ93100 1093 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 PIGSQ96S52 555 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 GLT8D2Q9H1C3 349 aa14.35□□□□□ -0.11
SNX17-208ENST00000493711 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX17-208ENST00000493711 CA12O43570 354 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 AOC2O75106 756 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 CCNA1P78396 465 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 TRIM29Q14134 588 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 SLC35G1Q2M3R5 365 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 QRICH1Q2TAL8 776 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 HOMER1Q86YM7 354 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 CCDC148Q8NFR7 591 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 RNF25Q96BH1 459 aaPredicted RBP14.34□□□□□ -0.11
SNX17-208ENST00000493711 TEX13BQ9BXU2 312 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 CPVLQ9H3G5 476 aa14.34□□□□□ -0.11
SNX17-208ENST00000493711 SLC25A27O95847 323 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 STAT3P40763 770 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 IER5LQ5T953 404 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 GALNT17Q6IS24 598 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 IPO9Q96P70 1041 aaKnown RBP14.33□□□□□ -0.12
SNX17-208ENST00000493711 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 CFHR5Q9BXR6 569 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 BARHL2Q9NY43 387 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 MORF4L1Q9UBU8 362 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 CCPG1Q9ULG6 757 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 MRPL11Q9Y3B7 192 aaKnown RBP14.33□□□□□ -0.12
SNX17-208ENST00000493711 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 PHIPQ8WWQ0 1821 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 ABCB11O95342 1321 aa14.33□□□□□ -0.12
SNX17-208ENST00000493711 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 TLR2O60603 784 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 JAK2O60674 1132 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 CYP2C8P10632 490 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 FDPSP14324 419 aaKnown RBP14.32□□□□□ -0.12
SNX17-208ENST00000493711 CALML3P27482 149 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 GJB2P29033 226 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 PKN1Q16512 942 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 FAM110CQ1W6H9 321 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 CCDC174Q6PII3 467 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 HEATR3Q7Z4Q2 680 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 RIOX2Q8IUF8 465 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 SHCBP1Q8NEM2 672 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 REPS2Q8NFH8 660 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 GPRC5AQ8NFJ5 357 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 RBPJLQ9UBG7 517 aa14.32□□□□□ -0.12
SNX17-208ENST00000493711 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 GNA11P29992 359 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
SNX17-208ENST00000493711 TMEM132BQ14DG7 1078 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 SNRNP48Q6IEG0 339 aaKnown RBP14.31□□□□□ -0.12
SNX17-208ENST00000493711 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 CPXCR1Q8N123 301 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 ZIC5Q96T25 663 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 PAGR1Q9BTK6 254 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 MROH8Q9H579 483 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
SNX17-208ENST00000493711 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
SNX17-208ENST00000493711 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
SNX17-208ENST00000493711 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
SNX17-208ENST00000493711 MRPL12P52815 198 aaKnown RBP14.3□□□□□ -0.12
SNX17-208ENST00000493711 NAPAP54920 295 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 ERVK-9P63128 1117 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 ERVK-24P63145 666 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 PDAP1Q13442 181 aaKnown RBP14.3□□□□□ -0.12
SNX17-208ENST00000493711 PLS1Q14651 629 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 SAFBQ15424 915 aaKnown RBP eCLIP14.3□□□□□ -0.12
SNX17-208ENST00000493711 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
SNX17-208ENST00000493711 WWC2Q6AWC2 1192 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
SNX17-208ENST00000493711 C8orf76Q96K31 380 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 C6orf50Q9HD87 102 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 BTBD7Q9P203 1132 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 ZNF536O15090 1300 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 ADGRA2Q96PE1 1338 aa14.3□□□□□ -0.12
SNX17-208ENST00000493711 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 STXBP3O00186 592 aa14.29□□□□□ -0.12
SNX17-208ENST00000493711 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms