RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
SOX2-OT-215ENST00000493521 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
SOX2-OT-215ENST00000493521 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
SOX2-OT-215ENST00000493521 CHD9Q3L8U1 2897 aa12.02□□□□□ -0.48
SOX2-OT-215ENST00000493521 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 HIP1O00291 1037 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 KIAA0355O15063 1070 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 REC8O95072 547 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 ASGR1P07306 291 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 SLC1A4P43007 532 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 NOVP48745 357 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 RBM25P49756 843 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 PDE4BQ07343 736 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 RNF180Q86T96 592 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 STAG1Q8WVM7 1258 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 MYLIPQ8WY64 445 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 TRERF1Q96PN7 1200 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 USP26Q9BXU7 913 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 STARD7Q9NQZ5 370 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 PRKAG2Q9UGJ0 569 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 ANAPC4Q9UJX5 808 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 NEDD4P46934 1319 aa12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 SPTBN5Q9NRC6 3674 aaKnown RBP12.02□□□□□ -0.49
SOX2-OT-215ENST00000493521 NFIBO00712 420 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 SGSM2O43147 1006 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 DUSP11O75319 330 aaKnown RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 FGRP09769 529 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 ACRP10323 421 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 SMPD1P17405 629 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 CDK7P50613 346 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 STAT2P52630 851 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 TAPT1Q6NXT6 567 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 CHST13Q8NET6 341 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 NACAP1Q9BZK3 213 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 PPP1R12CQ9BZL4 782 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 UPF3AQ9H1J1 476 aaKnown RBP12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 SEMA6BQ9H3T3 888 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 ACAD9Q9H845 621 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 TBX21Q9UL17 535 aa12.01□□□□□ -0.49
SOX2-OT-215ENST00000493521 CHD7Q9P2D1 2997 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 COPB2P35606 906 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 PBX2P40425 430 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 GJA9P57773 515 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 PSMC6P62333 389 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 CCDC96Q2M329 555 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 NSMFQ6X4W1 530 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 SLC30A10Q6XR72 485 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 ANKRD33Q7Z3H0 272 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 VWCEQ96DN2 955 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 IPO9Q96P70 1041 aaKnown RBP12□□□□□ -0.49
SOX2-OT-215ENST00000493521 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.497e-18■■■■□ 19.9
SOX2-OT-215ENST00000493521 ANO2Q9NQ90 1003 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 TOMM22Q9NS69 142 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 CYP39A1Q9NYL5 469 aa12□□□□□ -0.49
SOX2-OT-215ENST00000493521 GNEQ9Y223 722 aaKnown RBP12□□□□□ -0.49
SOX2-OT-215ENST00000493521 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
SOX2-OT-215ENST00000493521 ORC4O43929 436 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 GOLGA8HP0CJ92 632 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 RAG1P15918 1043 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 CST5P28325 142 aaPredicted RBP11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 OAZ1P54368 228 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 ALX1Q15699 326 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 MSL3Q8N5Y2 521 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 USP38Q8NB14 1042 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 CLEC4DQ8WXI8 215 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 TBC1D5Q92609 795 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 TSEN34Q9BSV6 310 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 ABHD16BQ9H3Z7 469 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 HELLSQ9NRZ9 838 aa11.99□□□□□ -0.49
SOX2-OT-215ENST00000493521 RAD50Q92878 1312 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 PDHBP11177 359 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 CSF2RAP15509 400 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 CYP2C18P33260 490 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 TNFAIP2Q03169 654 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 BAATQ14032 418 aaPredicted RBP11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 MCMDC2Q4G0Z9 681 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
SOX2-OT-215ENST00000493521 ZNF697Q5TEC3 545 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms