RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 PDHBP11177 359 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 SMPD1P17405 629 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 OAZ1P54368 228 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 TBC1D5Q92609 795 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 VTI1AQ96AJ9 217 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 RWDD1Q9H446 243 aaPredicted RBP10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 STARD7Q9NQZ5 370 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 TMEM39AQ9NV64 488 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 CYP39A1Q9NYL5 469 aa10.75□□□□□ -0.69
GTF3C5-210ENST00000489842 DYNC1LI2O43237 492 aaPredicted RBP10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 TOP1P11387 765 aaKnown RBP10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 GJA9P57773 515 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 PSMC6P62333 389 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 TNFAIP2Q03169 654 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 GNASQ5JWF2 1037 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 AKNAD1Q5T1N1 836 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 FAM109BQ6ICB4 259 aaPredicted RBP10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 TAPT1Q6NXT6 567 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 SLC17A8Q8NDX2 589 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 DCAF4Q8WV16 495 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 CLEC4DQ8WXI8 215 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 PPP1R12CQ9BZL4 782 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 UPF3AQ9H1J1 476 aaKnown RBP10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 ABHD16BQ9H3Z7 469 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 FBXO40Q9UH90 709 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 SYNPO2Q9UMS6 1093 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 TAF6LQ9Y6J9 622 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 GRIN2DO15399 1336 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 UMODL1Q5DID0 1318 aa10.74□□□□□ -0.69
GTF3C5-210ENST00000489842 GRXCR1A8MXD5 290 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 KIAA0355O15063 1070 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 PLA2G6O60733 806 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 KDM4AO75164 1064 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 ICAM1P05362 532 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 ACRP10323 421 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 GSPT1P15170 499 aaKnown RBP10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 RAG1P15918 1043 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 CALML3P27482 149 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 CDK7P50613 346 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 ZNF543Q08ER8 600 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 USH1GQ495M9 461 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 BTNL9Q6UXG8 535 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 MFSD6Q6ZSS7 791 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 SKAP1Q86WV1 359 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 MSL3Q8N5Y2 521 aaKnown RBP10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 COPS5Q92905 334 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 TTYH1Q9H313 450 aaPredicted RBP10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 OSBPL3Q9H4L5 887 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 CDH23Q9H251 3354 aa10.73□□□□□ -0.69
GTF3C5-210ENST00000489842 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 CYP2C18P33260 490 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 KIAA1211Q6ZU35 1233 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 C16orf59Q7L2K0 433 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 TLK2Q86UE8 772 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 TSEN34Q9BSV6 310 aaKnown RBP10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 DIAPH3Q9NSV4 1193 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 TBX21Q9UL17 535 aa10.72□□□□□ -0.69
GTF3C5-210ENST00000489842 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 ARVCFO00192 962 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 ZNF213O14771 459 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 ZMYM6O95789 1325 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 FDX1P10109 184 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 CSF2RAP15509 400 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 CST5P28325 142 aaPredicted RBP10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 ALDH5A1P51649 535 aaPredicted RBP10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 PTH1RQ03431 593 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 TKFCQ3LXA3 575 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 CYB5R4Q7L1T6 521 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 ANKRD33Q7Z3H0 272 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 FAM126BQ8IXS8 530 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 NUP133Q8WUM0 1156 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 MYLIPQ8WY64 445 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 RNPC3Q96LT9 517 aaKnown RBP10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 GLT1D1Q96MS3 346 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.692e-13■□□□□ 11.2
GTF3C5-210ENST00000489842 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 SENP2Q9HC62 589 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 COL20A1Q9P218 1284 aa10.71□□□□□ -0.69
GTF3C5-210ENST00000489842 MYH6P13533 1939 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 GBF1Q92538 1859 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 UNC80Q8N2C7 3258 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 ASB14A6NK59 587 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 DCDC2CA8MYV0 355 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 PBX2P40425 430 aa10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 RPS6P62753 249 aaKnown RBP10.7□□□□□ -0.7
GTF3C5-210ENST00000489842 FPGSQ05932 587 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms