RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CYP39A1Q9NYL5 469 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 LTBP2Q14767 1821 aa16.44■□□□□ 0.22
VTI1A-206ENST00000489142 SGSM2O43147 1006 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 CYP21A2P08686 494 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 USH1GQ495M9 461 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 RNF180Q86T96 592 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 KATNBL1Q9H079 304 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 PHF24Q9UPV7 400 aa16.43■□□□□ 0.22
VTI1A-206ENST00000489142 SZT2Q5T011 3432 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-206ENST00000489142 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-206ENST00000489142 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 ADAMTS4O75173 837 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-206ENST00000489142 SLC30A10Q6XR72 485 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 ABHD16BQ9H3Z7 469 aa16.42■□□□□ 0.22
VTI1A-206ENST00000489142 PRDM5Q9NQX1 630 aaPredicted RBP16.42■□□□□ 0.22
VTI1A-206ENST00000489142 SOX1O00570 391 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 CALML3P27482 149 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 CCDC178Q5BJE1 867 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 IFIT1BQ5T764 474 aaKnown RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 FBXO16Q8IX29 292 aaPredicted RBP16.41■□□□□ 0.22
VTI1A-206ENST00000489142 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
VTI1A-206ENST00000489142 ASB14A6NK59 587 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 DUSP11O75319 330 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 SEC23AQ15436 765 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 KCNA10Q16322 511 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 UBE2OQ9C0C9 1292 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 VAT1LQ9HCJ6 419 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 U3KPZ7 1027 aaPredicted RBP16.4■□□□□ 0.22
VTI1A-206ENST00000489142 LAMA3Q16787 3333 aa16.4■□□□□ 0.22
VTI1A-206ENST00000489142 E7EWF7 191 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 ACLYP53396 1101 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 BEX3Q00994 111 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 TRDNQ13061 729 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 SNX17Q15036 470 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 RNF207Q6ZRF8 634 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
VTI1A-206ENST00000489142 PQBP1O60828 265 aaKnown RBP16.38■□□□□ 0.21
VTI1A-206ENST00000489142 BMP8BP34820 402 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 NT5C2P49902 561 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 ALDH5A1P51649 535 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-206ENST00000489142 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 TLE2Q04725 743 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-206ENST00000489142 CENPQQ7L2Z9 268 aaPredicted RBP16.38■□□□□ 0.21
VTI1A-206ENST00000489142 LRCH3Q96II8 777 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 PDLIM7Q9NR12 457 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 PRKAG2Q9UGJ0 569 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 WDR19Q8NEZ3 1342 aa16.38■□□□□ 0.21
VTI1A-206ENST00000489142 BAZ2BQ9UIF8 2168 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 CTAGE5O15320 804 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 ASGR1P07306 291 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 SMPD1P17405 629 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 GJA9P57773 515 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 RPS6P62753 249 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 RALYLQ86SE5 291 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 MAP4K1Q92918 833 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 LBHD1Q9BQE6 289 aaPredicted RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 TSEN34Q9BSV6 310 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 UPF3AQ9H1J1 476 aaKnown RBP16.37■□□□□ 0.21
VTI1A-206ENST00000489142 JMJD4Q9H9V9 463 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 STARD7Q9NQZ5 370 aa16.37■□□□□ 0.21
VTI1A-206ENST00000489142 A0A1W2PPC1 479 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 TRIM43BA6NCK2 446 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 ANTXR2P58335 489 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-206ENST00000489142 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 TLK2Q86UE8 772 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 TDHQ8IZJ6 230 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 NCOA7Q8NI08 942 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 VTI1AQ96AJ9 217 aa16.36■□□□□ 0.21
VTI1A-206ENST00000489142 TRIM43Q96BQ3 446 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-206ENST00000489142 ESYT1Q9BSJ8 1104 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms