RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 SPDYE5A6NIY4 337 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 C19orf81C9J6K1 198 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 PPP6R2O75170 966 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 BMP15O95972 392 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 LIG1P18858 919 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 FMR1Q06787 632 aaKnown RBP eCLIP7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 TRAF1Q13077 416 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 ZNF174Q15697 407 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 LETM2Q2VYF4 491 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 USP17L6PQ6QN14 398 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 GADL1Q6ZQY3 521 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 NEK8Q86SG6 692 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 ERO1BQ86YB8 467 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 CCAR1Q8IX12 1150 aaKnown RBP7.89□□□□□ -1.15
PDAP1-203ENST00000488214 KRI1Q8N9T8 703 aaKnown RBP7.89□□□□□ -1.15
PDAP1-203ENST00000488214 ATG4CQ96DT6 458 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 ANO3Q9BYT9 981 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 GOLPH3LQ9H4A5 285 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 PSTPIP2Q9H939 334 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.89□□□□□ -1.15
PDAP1-203ENST00000488214 TMEM63CQ9P1W3 806 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 CCPG1Q9ULG6 757 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 PPP1R9AQ9ULJ8 1098 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 PCDHA7Q9UN72 937 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 AFG3L2Q9Y4W6 797 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 MRVI1Q9Y6F6 885 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 PLXNB2O15031 1838 aa7.89□□□□□ -1.15
PDAP1-203ENST00000488214 A0A1W2PQ27 194 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 A0A1W2PQ64 194 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 A0A1W2PQD8 194 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 SPDYE3A6NKU9 549 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 ICAM1P05362 532 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 HOXA13P31271 388 aaPredicted RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 MRPL12P52815 198 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 PPATQ06203 517 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 PPIL2Q13356 520 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 MAP3K11Q16584 847 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 ZSCAN23Q3MJ62 389 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 CCDC183Q5T5S1 534 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 CPXCR1Q8N123 301 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 PRPF38AQ8NAV1 312 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 RBM46Q8TBY0 533 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 TBCKQ8TEA7 893 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 OPTNQ96CV9 577 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 NUP62CLQ9H1M0 184 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 GBA2Q9HCG7 927 aaPredicted RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 RAVER2Q9HCJ3 691 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 HOMER2Q9NSB8 354 aa7.88□□□□□ -1.15
PDAP1-203ENST00000488214 DDX19AQ9NUU7 478 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 FBXO2Q9UK22 296 aaPredicted RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 MRPL11Q9Y3B7 192 aaKnown RBP7.88□□□□□ -1.15
PDAP1-203ENST00000488214 ZNF536O15090 1300 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 A0A0G2JLL6 359 aaPredicted RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 A0A1B0GVL5 298 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 SYCE3A1L190 88 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 VWA3AA6NCI4 1184 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 SPDYE16A6NNV3 312 aaPredicted RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 OPLAHO14841 1288 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 IRF6O14896 467 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 KINO60870 393 aaKnown RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 CUTAO60888 179 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 ZBED4O75132 1171 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 NR1I2O75469 434 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 CELF2O95319 508 aaKnown RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 CFBP00751 764 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 OR52Z1P0C646 297 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 ALAS1P13196 640 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 PFKFB1P16118 471 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 CLK2P49760 499 aaKnown RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 ATP2C1P98194 919 aaPredicted RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 FAM160A1Q05DH4 1040 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 PTGDRQ13258 359 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 AXDND1Q5T1B0 1012 aaPredicted RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 TREML2Q5T2D2 321 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 ADALQ6DHV7 355 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
PDAP1-203ENST00000488214 WNK4Q96J92 1243 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 AGBL1Q96MI9 1066 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 CLIC6Q96NY7 704 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 SLC38A10Q9HBR0 1119 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 DACT1Q9NYF0 836 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 KIAA1217Q5T5P2 1943 aa7.87□□□□□ -1.15
PDAP1-203ENST00000488214 MYPNQ86TC9 1320 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 DOCK5Q9H7D0 1870 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 PLXNA1Q9UIW2 1896 aa7.86□□□□□ -1.15
PDAP1-203ENST00000488214 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.86□□□□□ -1.15
PDAP1-203ENST00000488214 GCOM1H8Y6P7 765 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms