RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 COL4A4P53420 1690 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 A0A0U1RQG5 324 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 APAF1O14727 1248 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 ERC2O15083 957 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 KLRK1P26718 216 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 MMP16P51512 607 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 GJA9P57773 515 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 RTP1P59025 263 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 CCDC96Q2M329 555 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 TSNAXIP1Q2TAA8 658 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 CWF19L2Q2TBE0 894 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 TMEM179Q6ZVK1 233 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 RNF180Q86T96 592 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 DZIP1Q86YF9 867 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 DEFB123Q8N688 67 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 NUP133Q8WUM0 1156 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 PDLIM7Q9NR12 457 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 MAP3K20Q9NYL2 800 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 THEGQ9P2T0 379 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 TBX21Q9UL17 535 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 ZBTB21Q9ULJ3 1066 aa3.31□□□□□ -1.88
DEPDC1-203ENST00000488146 LAMA4Q16363 1823 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 DNAJC25-GNG10A0A024R161 153 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CLRN2A0PK11 232 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 B4DLN1 442 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 TCP10L2B9ZVM9 353 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CCER2I3L3R5 266 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 DUSP11O75319 330 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 TIMP1P01033 207 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ANXA1P04083 346 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CLTBP09497 229 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 AKR1A1P14550 325 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 BTDP43251 543 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 RBM5P52756 815 aaKnown RBP eCLIP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MRPL12P52815 198 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 GRM1Q13255 1194 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 AAMPQ13685 434 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ECM1Q16610 540 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ZNF792Q3KQV3 632 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 NAALADL2Q58DX5 795 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 PLA2G2CQ5R387 149 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CCSAPQ6IQ19 270 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 B4GALNT3Q6L9W6 998 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MFSD5Q6N075 450 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 SH3RF1Q7Z6J0 888 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 RPUSD2Q8IZ73 545 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ZNF511Q8NB15 262 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MAFAQ8NHW3 353 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 SMCR8Q8TEV9 937 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 SH3TC2Q8TF17 1288 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 TRIB2Q92519 343 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 EDC3Q96F86 508 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 COL25A1Q9BXS0 654 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 USP44Q9H0E7 712 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 BICC1Q9H694 974 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ZNF287Q9HBT7 754 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 IL23AQ9NPF7 189 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CYLDQ9NQC7 956 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ATP8A2Q9NTI2 1148 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CPA4Q9UI42 421 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 RWDD3Q9Y3V2 267 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 SIP14410 1827 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CD4P01730 458 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 INPP5BP32019 993 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ARHGAP4P98171 946 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 FPGSQ05932 587 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 CACNB2Q08289 660 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 TRAF1Q13077 416 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MTFR1Q15390 333 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 EPHA10Q5JZY3 1008 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ZSCAN25Q6NSZ9 544 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 FAM160B2Q86V87 743 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ATCAYQ86WG3 371 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 TMEM199Q8N511 208 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 GMCL1P1Q8NEA9 526 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MKL1Q969V6 931 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 DEFB118Q96PH6 123 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 MPHOSPH6Q99547 160 aaKnown RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 RHOBTB2Q9BYZ6 727 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 RBPJLQ9UBG7 517 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 SALL2Q9Y467 1007 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 ZHX2Q9Y6X8 837 aa3.3□□□□□ -1.88
DEPDC1-203ENST00000488146 PI4K2BG5E9Z4 385 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SOX1O00570 391 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 RAB11FIP3O75154 756 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 PAPLNO95428 1278 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SUPT20HL2P0C7V6 817 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 UBTFL1P0CB47 393 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 GYG1P46976 350 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SH3BP2P78314 561 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 SLFN5Q08AF3 891 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 COG2Q14746 738 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 MSS51Q4VC12 460 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 CCDC178Q5BJE1 867 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 FAM26DQ5JW98 314 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 GADL1Q6ZQY3 521 aa3.29□□□□□ -1.88
DEPDC1-203ENST00000488146 G2E3Q7L622 706 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms