RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
NR1H3-224ENST00000487913 FAM133AQ8N9E0 248 aa16.16■□□□□ 0.18
NR1H3-224ENST00000487913 PDGFCQ9NRA1 345 aa16.16■□□□□ 0.18
NR1H3-224ENST00000487913 HOMER2Q9NSB8 354 aa16.16■□□□□ 0.18
NR1H3-224ENST00000487913 TNKSO95271 1327 aa16.16■□□□□ 0.18
NR1H3-224ENST00000487913 SOWAHBA6NEL2 793 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 USP17L21D6R901 530 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 TMCO2Q7Z6W1 182 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-224ENST00000487913 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 KCNH6Q9H252 994 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 SLC38A10Q9HBR0 1119 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 LMCD1Q9NZU5 365 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
NR1H3-224ENST00000487913 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-224ENST00000487913 MYH8P13535 1937 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 F5H6K3 240 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 DCXO43602 365 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 MBD4O95243 580 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 SUPT20HL2P0C7V6 817 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 KLRC3Q07444 240 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 TTF1Q15361 905 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-224ENST00000487913 AACSQ86V21 672 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 PPP1R13LQ8WUF5 828 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 PHOX2BQ99453 314 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
NR1H3-224ENST00000487913 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 USP34Q70CQ2 3546 aa16.14■□□□□ 0.17
NR1H3-224ENST00000487913 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 RFC2P35250 354 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 PTCRAQ6ISU1 281 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-224ENST00000487913 TAPT1Q6NXT6 567 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 EEPD1Q7L9B9 569 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 FBXO16Q8IX29 292 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-224ENST00000487913 SUGCTQ9HAC7 445 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 ZNF536O15090 1300 aa16.13■□□□□ 0.17
NR1H3-224ENST00000487913 POTEB3A0JP26 581 aa16.12■□□□□ 0.17
NR1H3-224ENST00000487913 GRXCR2A6NFK2 248 aa16.12■□□□□ 0.17
NR1H3-224ENST00000487913 GOLIM4O00461 696 aa16.12■□□□□ 0.17
NR1H3-224ENST00000487913 POTEBQ6S5H4 581 aa16.12■□□□□ 0.17
NR1H3-224ENST00000487913 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
NR1H3-224ENST00000487913 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
NR1H3-224ENST00000487913 ASB14A6NK59 587 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 OAZ1P54368 228 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 IQSEC1Q6DN90 963 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 HFE2Q6ZVN8 426 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 TMEM57Q8N5G2 664 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 DNAJC2Q99543 621 aaKnown RBP16.11■□□□□ 0.17
NR1H3-224ENST00000487913 ACAD9Q9H845 621 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 NYAP2Q9P242 653 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 Q9Y3F1 56 aa16.11■□□□□ 0.17
NR1H3-224ENST00000487913 TRIOO75962 3097 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 BAIAP3O94812 1187 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 CHGBP05060 677 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 KCNJ6P48051 423 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 WDR5P61964 334 aaKnown RBP16.1■□□□□ 0.17
NR1H3-224ENST00000487913 PURAQ00577 322 aaKnown RBP16.1■□□□□ 0.17
NR1H3-224ENST00000487913 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 RETREG2Q8NC44 543 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
NR1H3-224ENST00000487913 COG6Q9Y2V7 657 aa16.1■□□□□ 0.17
NR1H3-224ENST00000487913 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
NR1H3-224ENST00000487913 RBAK-RBAKDNI3L0D1 243 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 IPO8O15397 1037 aaKnown RBP16.09■□□□□ 0.17
NR1H3-224ENST00000487913 MYL3P08590 195 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 RASA1P20936 1047 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 ERVK-21P61565 698 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 DEFB103AP81534 67 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 NBPF20Q3BBV1 942 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 ZBED2Q9BTP6 218 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 POLR3EQ9NVU0 708 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
NR1H3-224ENST00000487913 PTPRSQ13332 1948 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-224ENST00000487913 H3BQ06 376 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-224ENST00000487913 ADD2P35612 726 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 STK11IPQ8N1F8 1099 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 PURBQ96QR8 312 aaKnown RBP16.08■□□□□ 0.16
NR1H3-224ENST00000487913 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
NR1H3-224ENST00000487913 MTG1Q9BT17 334 aaPredicted RBP16.08■□□□□ 0.16
NR1H3-224ENST00000487913 IL1RAPL2Q9NP60 686 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 EXOC6BQ9Y2D4 811 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 ZNF318Q5VUA4 2279 aa16.08■□□□□ 0.16
NR1H3-224ENST00000487913 LINC01553A4QN01 128 aa16.07■□□□□ 0.16
NR1H3-224ENST00000487913 ZP2Q05996 745 aa16.07■□□□□ 0.16
NR1H3-224ENST00000487913 GPNMBQ14956 572 aa16.07■□□□□ 0.16
NR1H3-224ENST00000487913 DUSP28Q4G0W2 176 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms