RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 SLFN13Q68D06 897 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.6□□□□□ -0.71
VCP-206ENST00000480327 MKL1Q969V6 931 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 CDX2Q99626 313 aaPredicted RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 TINF2Q9BSI4 451 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 SEMA6BQ9H3T3 888 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 SENP2Q9HC62 589 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 PRDM5Q9NQX1 630 aaPredicted RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 PPP1R9AQ9ULJ8 1098 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 RIPK3Q9Y572 518 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 ADCY6O43306 1168 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 SLC25A27O95847 323 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 PSMA5P28066 241 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 STAT3P40763 770 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 WTAPQ15007 396 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 SART3Q15020 963 aaKnown RBP10.59□□□□□ -0.71
VCP-206ENST00000480327 SEC23AQ15436 765 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 CCDC178Q5BJE1 867 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 BLOC1S2Q6QNY1 142 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 DHX32Q7L7V1 743 aaKnown RBP10.59□□□□□ -0.71
VCP-206ENST00000480327 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 IGDCC4Q8TDY8 1250 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 FGD4Q96M96 766 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 TTC14Q96N46 770 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 MMP19Q99542 508 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
VCP-206ENST00000480327 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
VCP-206ENST00000480327 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
VCP-206ENST00000480327 DNAJC25-GNG10A0A024R161 153 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 A0A1W2PQ45 241 aaPredicted RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 A0A1W2PQY0 241 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 SH2B2O14492 632 aaPredicted RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 KIAA0355O15063 1070 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 SNAI1O95863 264 aaPredicted RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 SLC1A4P43007 532 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 NOVP48745 357 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 NT5C2P49902 561 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 FGD1P98174 961 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 CCSAPQ6IQ19 270 aaPredicted RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 NFXL1Q6ZNB6 911 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 KCTD1Q719H9 257 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 RAB11FIP4Q86YS3 637 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 GMCL1P1Q8NEA9 526 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 UPF2Q9HAU5 1272 aaKnown RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 LY9Q9HBG7 655 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 SLC5A4Q9NY91 659 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 PRKAG2Q9UGJ0 569 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 DIS3Q9Y2L1 958 aaKnown RBP10.58□□□□□ -0.72
VCP-206ENST00000480327 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
VCP-206ENST00000480327 TRANK1O15050 2925 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 HMGB1P09429 215 aaKnown RBP10.57□□□□□ -0.72
VCP-206ENST00000480327 CLTBP09497 229 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 RARBP10826 455 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 BMP3P12645 472 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
VCP-206ENST00000480327 FAAP100Q0VG06 881 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 IKQ13123 557 aaPredicted RBP10.57□□□□□ -0.72
VCP-206ENST00000480327 Q6ZUG5 572 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 KLHDC9Q8NEP7 349 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 ANKS1AQ92625 1134 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 TMEM87BQ96K49 555 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 NAP1L2Q9ULW6 460 aaPredicted RBP10.57□□□□□ -0.72
VCP-206ENST00000480327 CYP46A1Q9Y6A2 500 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 MYO9BQ13459 2157 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 TTC28Q96AY4 2481 aa10.57□□□□□ -0.72
VCP-206ENST00000480327 CCDC69A6NI79 296 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 TMEM232C9JQI7 657 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
VCP-206ENST00000480327 PDHBP11177 359 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 AKR1A1P14550 325 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 RXRAP19793 462 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 ANAPC15P60006 121 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 KCTD2Q14681 263 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 MAMDC4Q6UXC1 1216 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 RUFY3Q7L099 469 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 CCDC144CPQ8IYA2 1237 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 NUP133Q8WUM0 1156 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 GMCL1Q96IK5 515 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 SLF1Q9BQI6 1058 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
VCP-206ENST00000480327 KATNBL1Q9H079 304 aa10.56□□□□□ -0.72
VCP-206ENST00000480327 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms