RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 CENPFP49454 3210 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 APOBRQ0VD83 1088 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 C8orf34Q49A92 452 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 APOA5Q6Q788 366 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 FBXO11Q86XK2 927 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 CMTR1Q8N1G2 835 aaKnown RBP21.93■■□□□ 1.1
AGRN-208ENST00000479707 BRF1Q92994 677 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 RIOX1Q9H6W3 641 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 HMX1Q9NP08 348 aaPredicted RBP21.93■■□□□ 1.1
AGRN-208ENST00000479707 RPTORQ8N122 1335 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 DNAJC25-GNG10A0A024R161 153 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 POTEB2H3BUK9 544 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 EIF5BO60841 1220 aaKnown RBP21.92■■□□□ 1.1
AGRN-208ENST00000479707 PLEKHA8P1O95397 391 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 CCND3P30281 292 aaPredicted RBP21.92■■□□□ 1.1
AGRN-208ENST00000479707 CNTN2Q02246 1040 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 OLFML2BQ68BL8 750 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 RUFY3Q7L099 469 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.92■■□□□ 1.1
AGRN-208ENST00000479707 CCDC82Q8N4S0 544 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 FANCBQ8NB91 859 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 CLEC4DQ8WXI8 215 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 UPF3BQ9BZI7 483 aaKnown RBP21.92■■□□□ 1.1
AGRN-208ENST00000479707 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.92■■□□□ 1.1
AGRN-208ENST00000479707 ZSWIM6Q9HCJ5 1215 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 PNMA2Q9UL42 364 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 CYP46A1Q9Y6A2 500 aa21.92■■□□□ 1.1
AGRN-208ENST00000479707 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
AGRN-208ENST00000479707 PTPDC1A2A3K4 754 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 ZBTB5O15062 677 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 ZBTB43O43298 467 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 PRAMEF19Q5SWL8 479 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 MAP3K21Q5TCX8 1036 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 SRBD1Q8N5C6 995 aaKnown RBP21.91■■□□□ 1.1
AGRN-208ENST00000479707 MTMR8Q96EF0 704 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 DEFB118Q96PH6 123 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 CYP39A1Q9NYL5 469 aa21.91■■□□□ 1.1
AGRN-208ENST00000479707 DIS3Q9Y2L1 958 aaKnown RBP21.91■■□□□ 1.1
AGRN-208ENST00000479707 CNGA1P29973 690 aa21.9■■□□□ 1.1
AGRN-208ENST00000479707 GNAQP50148 359 aa21.9■■□□□ 1.1
AGRN-208ENST00000479707 BAATQ14032 418 aaPredicted RBP21.9■■□□□ 1.1
AGRN-208ENST00000479707 PURBQ96QR8 312 aaKnown RBP21.9■■□□□ 1.1
AGRN-208ENST00000479707 TINF2Q9BSI4 451 aa21.9■■□□□ 1.1
AGRN-208ENST00000479707 AMNQ9BXJ7 453 aa21.9■■□□□ 1.1
AGRN-208ENST00000479707 TM6SF1Q9BZW5 370 aa21.9■■□□□ 1.1
AGRN-208ENST00000479707 PFASO15067 1338 aa21.89■■□□□ 1.1
AGRN-208ENST00000479707 ABCB11O95342 1321 aa21.89■■□□□ 1.1
AGRN-208ENST00000479707 GOLGA8AA7E2F4 631 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 GOLGA8BA8MQT2 603 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 PPP1R11O60927 126 aaPredicted RBP21.89■■□□□ 1.09
AGRN-208ENST00000479707 IGHA2P01877 340 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 GJB1P08034 283 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 CALML3P27482 149 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 TRPV1Q8NER1 839 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 TBC1D5Q92609 795 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 LZTS2Q9BRK4 669 aa21.89■■□□□ 1.09
AGRN-208ENST00000479707 LARP6Q9BRS8 491 aaKnown RBP21.89■■□□□ 1.09
AGRN-208ENST00000479707 SOWAHBA6NEL2 793 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 RTN1Q16799 776 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 SLC30A10Q6XR72 485 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 RNF207Q6ZRF8 634 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 FAM133AQ8N9E0 248 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 U2AF1L4Q8WU68 220 aaKnown RBP21.88■■□□□ 1.09
AGRN-208ENST00000479707 FGD4Q96M96 766 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 PAK6Q9NQU5 681 aaPredicted RBP21.88■■□□□ 1.09
AGRN-208ENST00000479707 PDRG1Q9NUG6 133 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 MRPL11Q9Y3B7 192 aaKnown RBP21.88■■□□□ 1.09
AGRN-208ENST00000479707 PCDHA1Q9Y5I3 950 aa21.88■■□□□ 1.09
AGRN-208ENST00000479707 RBBP6Q7Z6E9 1792 aaKnown RBP21.88■■□□□ 1.09
AGRN-208ENST00000479707 MCM3APO60318 1980 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 PNMA6FA0A0J9YX94 578 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 hCG_1642624A0A1W2PR95 340 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 SGPL1O95470 568 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 TFRCP02786 760 aaKnown RBP21.87■■□□□ 1.09
AGRN-208ENST00000479707 TMTC3Q6ZXV5 915 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 RRP36Q96EU6 259 aaKnown RBP21.87■■□□□ 1.09
AGRN-208ENST00000479707 SPZ1Q9BXG8 430 aa21.87■■□□□ 1.09
AGRN-208ENST00000479707 DDX49Q9Y6V7 483 aaKnown RBP21.87■■□□□ 1.09
AGRN-208ENST00000479707 LCTP09848 1927 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 CYBAP13498 195 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 SMARCA1P28370 1054 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 CDC27P30260 824 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 GJA8P48165 433 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 ANAPC15P60006 121 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 RPS6P62753 249 aaKnown RBP21.86■■□□□ 1.09
AGRN-208ENST00000479707 TOB2Q14106 344 aaPredicted RBP21.86■■□□□ 1.09
AGRN-208ENST00000479707 AGXT2Q9BYV1 514 aa21.86■■□□□ 1.09
AGRN-208ENST00000479707 RBM28Q9NW13 759 aaKnown RBP21.86■■□□□ 1.09
AGRN-208ENST00000479707 SNAI1O95863 264 aaPredicted RBP21.85■■□□□ 1.09
AGRN-208ENST00000479707 METAP2P50579 478 aaKnown RBP eCLIP21.85■■□□□ 1.091e-7■■■■□ 20.7
AGRN-208ENST00000479707 ANO1Q5XXA6 986 aa21.85■■□□□ 1.09
AGRN-208ENST00000479707 ZNF467Q7Z7K2 595 aaPredicted RBP21.85■■□□□ 1.09
AGRN-208ENST00000479707 FBXL16Q8N461 479 aa21.85■■□□□ 1.09
AGRN-208ENST00000479707 SHISA4Q96DD7 197 aa21.85■■□□□ 1.09
AGRN-208ENST00000479707 FAM217BQ9NTX9 383 aaPredicted RBP21.85■■□□□ 1.09
AGRN-208ENST00000479707 SEC63Q9UGP8 760 aaKnown RBP21.85■■□□□ 1.09
AGRN-208ENST00000479707 ASTN1O14525 1302 aa21.84■■□□□ 1.09
AGRN-208ENST00000479707 CFBP00751 764 aa21.84■■□□□ 1.09
AGRN-208ENST00000479707 ADD1P35611 737 aaKnown RBP21.84■■□□□ 1.09
AGRN-208ENST00000479707 MAMDC4Q6UXC1 1216 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms