RNA–Protein interactions for RNA: ENST00000476794.1

FNDC3B-208, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-208ENST00000476794 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 TM4SF20Q53R12 229 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 SLC35F1Q5T1Q4 408 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 USP53Q70EK8 1073 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 NETO1Q8TDF5 533 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 C1orf159Q96HA4 380 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 GPRC5CQ9NQ84 441 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 SEMA3GQ9NS98 782 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 NDOR1Q9UHB4 597 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 SFMBT1Q9UHJ3 866 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 COL4A3BPQ9Y5P4 624 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 BACE2Q9Y5Z0 518 aa8.25□□□□□ -1.09
FNDC3B-208ENST00000476794 SSU72P8A0A1W2PR75 194 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 THBDP07204 575 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 GABREP78334 506 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 INTS5Q6P9B9 1019 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 KREMEN2Q8NCW0 462 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 SLC7A14Q8TBB6 771 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 ZCRB1Q8TBF4 217 aaKnown RBP8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 SLC12A9Q9BXP2 914 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 FOXP3Q9BZS1 431 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 TMX1Q9H3N1 280 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 SLC52A2Q9HAB3 445 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 PIM2Q9P1W9 311 aa8.24□□□□□ -1.09
FNDC3B-208ENST00000476794 hCG_2014768A0A024R1R8 64 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 GSTM1P09488 218 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 SDSP20132 328 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 PCBP3P57721 371 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 IFI16Q16666 785 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 TRIM61Q5EBN2 209 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 DENND5AQ6IQ26 1287 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 COPS5Q92905 334 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 PCDH12Q9NPG4 1184 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 DUSP13Q9UII6 198 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 TCFL5Q9UL49 500 aa8.23□□□□□ -1.09
FNDC3B-208ENST00000476794 TMEM265A0A087WTH1 108 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 PAX4O43316 350 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 FKTNO75072 461 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 ZNF205O95201 554 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 LTKP29376 864 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 SEPHS1P49903 392 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 IGBP1P78318 339 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 GAB4Q2WGN9 574 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 RTP2Q5QGT7 225 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 BRAPQ7Z569 592 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 LINC00116Q8NCU8 138 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 FRS2Q8WU20 508 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 PTPRN2Q92932 1015 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 BRINP2Q9C0B6 783 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 TRIM39Q9HCM9 518 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 TRAF6Q9Y4K3 522 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 SNX11Q9Y5W9 270 aa8.22□□□□□ -1.09
FNDC3B-208ENST00000476794 ASXL2Q76L83 1435 aa8.21□□□□□ -1.09
FNDC3B-208ENST00000476794 FOSL1P15407 271 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 CNNM4Q6P4Q7 775 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 CREG2Q8IUH2 290 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 KSR1Q8IVT5 923 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 PPIL6Q8IXY8 311 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 ATP13A1Q9HD20 1204 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 CLEC1BQ9P126 229 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 PITPNM2Q9BZ72 1349 aa8.21□□□□□ -1.1
FNDC3B-208ENST00000476794 A0A087X0B3 334 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 KCNQ2O43526 872 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 EFCAB14O75071 495 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 TAL1P17542 331 aaPredicted RBP8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 IRAK1P51617 712 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 RCSD1Q6JBY9 416 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 ZPBP2Q6X784 338 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 FGD2Q7Z6J4 655 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 DCAF4Q8WV16 495 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 CDADC1Q9BWV3 514 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 TMEFF2Q9UIK5 374 aaPredicted RBP8.2□□□□□ -1.1
FNDC3B-208ENST00000476794 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 ARNTLO00327 626 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 MEFVO15553 781 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 DNAJC8O75937 253 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 VIL1P09327 827 aaKnown RBP8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 PLS3P13797 630 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 CNGA1P29973 690 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 HOXA10P31260 410 aaPredicted RBP8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 TXKP42681 527 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 ANAPC15P60006 121 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 AMPD3Q01432 767 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 STYK1Q6J9G0 422 aa8.19□□□□□ -1.1
FNDC3B-208ENST00000476794 RNF111Q6ZNA4 994 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms