RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MSL3P1P0C860 447 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 HNRNPH1P31943 449 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 LAMB3Q13751 1172 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 PLEKHG4Q58EX7 1191 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SNAP47Q5SQN1 464 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ANKRD45Q5TZF3 282 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 LARP1BQ659C4 914 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC70Q6NSX1 233 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 LRRC31Q6UY01 552 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 CCDC65Q8IXS2 484 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SH3TC2Q8TF17 1288 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 RSRC1Q96IZ7 334 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 EXOC1Q9NV70 894 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 QPCTLQ9NXS2 382 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ITM2BQ9Y287 266 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 MAP3K1Q13233 1512 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ZFYVE16Q7Z3T8 1539 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 BCORL1Q5H9F3 1711 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 INSRP06213 1382 aa6.78□□□□□ -1.32
ECHDC1-215ENST00000475319 ELP1O95163 1332 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 DNAJC6O75061 913 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 SASH3O75995 380 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 TRIM37O94972 964 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 IGHDP01880 384 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 NAT2P11245 290 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 H2AFXP16104 143 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 CYP11B2P19099 503 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 BDNFP23560 247 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 HOXA10P31260 410 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 SLC7A5Q01650 507 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 POU5F1Q01860 360 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 CAMK2GQ13555 558 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC92Q53HC0 331 aaPredicted RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 WLSQ5T9L3 541 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 FBXO38Q6PIJ6 1188 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 B4GALNT2Q8NHY0 566 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 ERMNQ8TAM6 284 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC47Q96A33 483 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 SHDQ96IW2 340 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 OSBPL9Q96SU4 736 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 TCF12Q99081 682 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 ZCCHC2Q9C0B9 1178 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 SPC25Q9HBM1 224 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 ODF2LQ9ULJ1 636 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 PPT2Q9UMR5 302 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 FHOD1Q9Y613 1164 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 GJA3Q9Y6H8 435 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 NUP153P49790 1475 aaKnown RBP6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 ARHGEF40Q8TER5 1519 aa6.77□□□□□ -1.33
ECHDC1-215ENST00000475319 MYO1BO43795 1136 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CEP104O60308 925 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CDC45O75419 566 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 MBD3O95983 291 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 FESP07332 822 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 PNMA6AP0CW24 399 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 RHOQP17081 205 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 LMNB2Q03252 620 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 SCRN1Q12765 414 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC184Q52MB2 194 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 LRRC23Q53EV4 343 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 AKNAD1Q5T1N1 836 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CDCA2Q69YH5 1023 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CDC37L1Q7L3B6 337 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 KRT25Q7Z3Z0 450 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 LRP10Q7Z4F1 713 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 ARHGAP22Q7Z5H3 698 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 RNF168Q8IYW5 571 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CELF2-AS1Q8N7Q2 184 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 GBP7Q8N8V2 638 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 NEK9Q8TD19 979 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 PARD3BQ8TEW8 1205 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 NKD1Q969G9 470 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 SEZ6LQ9BYH1 1024 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 TIMMDC1Q9NPL8 285 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 ANKRD36BQ8N2N9 1353 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 GOLGA6L9A6NEM1 432 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 MMP20O60882 483 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 MAP4K4O95819 1239 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 FOSL1P15407 271 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 PSMD7P51665 324 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 ZBED6P86452 979 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CLPPQ16740 277 aaPredicted RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 WDR44Q5JSH3 913 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 C20orf194Q5TEA3 1177 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CPLX2Q6PUV4 134 aaKnown RBP6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 ARMC9Q7Z3E5 817 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 UBE2Q1Q7Z7E8 422 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 SLITRK4Q8IW52 837 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 CCDC170Q8IYT3 715 aa6.76□□□□□ -1.33
ECHDC1-215ENST00000475319 LILRB2Q8N423 598 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms