RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	TLK2	Q86UE8	772 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	TMEM199	Q8N511	208 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	PCSK9	Q8NBP7	692 aa	Known RBP	11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	GMCL1P1	Q8NEA9	526 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	CHST13	Q8NET6	341 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	APPBP2	Q92624	585 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	MKNK2	Q9HBH9	465 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	IL17RB	Q9NRM6	502 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	RNF146	Q9NTX7	359 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	PLIN4	Q96Q06	1357 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	MYH4	Q9Y623	1939 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	XIRP2	A4UGR9	3374 aa		11.5	□□□□□ -0.57
MCF2L-223	ENST00000473345	DYNC1LI2	O43237	492 aa	Predicted RBP	11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	CYP2C9	P11712	490 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	BMP3	P12645	472 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	KCNA4	P22459	653 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	FSCN1	Q16658	493 aa	Known RBP	11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	GIMAP6	Q6P9H5	292 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	KCTD1	Q719H9	257 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	IFNL3	Q8IZI9	196 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	NEDD1	Q8NHV4	660 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	UHRF1	Q96T88	793 aa	Predicted RBP	11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	GAS2L1	Q99501	681 aa	Predicted RBP	11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	TRMT13	Q9NUP7	481 aa	Known RBP	11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	FEM1B	Q9UK73	627 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	MROH7	Q68CQ1	1323 aa		11.49	□□□□□ -0.57
MCF2L-223	ENST00000473345	RNF113A	O15541	343 aa	Known RBP	11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	FGB	P02675	491 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	MCC	P23508	829 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	OAZ1	P54368	228 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	TTBK2	Q6IQ55	1244 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	CCDC174	Q6PII3	467 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	AMOTL1	Q8IY63	956 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	LRRCC1	Q9C099	1032 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	ACAD9	Q9H845	621 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	CERS4	Q9HA82	394 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	ECHDC1	Q9NTX5	307 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	CYP39A1	Q9NYL5	469 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	DDX19B	Q9UMR2	479 aa		11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
MCF2L-223	ENST00000473345	HMMR	O75330	724 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	TTLL1	O95922	423 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	ALAS1	P13196	640 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	MRPS5	P82675	430 aa	Known RBP	11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	TFAP4	Q01664	338 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	GPNMB	Q14956	572 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	TCTN1	Q2MV58	587 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	MORC4	Q8TE76	937 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	TRERF1	Q96PN7	1200 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	PRR12	Q9ULL5	1215 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	SCN5A	Q14524	2016 aa		11.47	□□□□□ -0.57
MCF2L-223	ENST00000473345	PATL2	C9JE40	543 aa	Known RBP	11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	NFIB	O00712	420 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	TLR3	O15455	904 aa	Known RBP	11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	TDO2	P48775	406 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	CTDSPL2	Q05D32	466 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	RAB30	Q15771	203 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	NOL8	Q76FK4	1167 aa	Known RBP	11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	MICALL1	Q8N3F8	863 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	PI4K2B	Q8TCG2	481 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	STAG1	Q8WVM7	1258 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	COPS5	Q92905	334 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	DDRGK1	Q96HY6	314 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	GMCL1	Q96IK5	515 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	CTAGE1	Q96RT6	745 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	EPHX3	Q9H6B9	360 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	SPC25	Q9HBM1	224 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	FBXO40	Q9UH90	709 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	MSRA	Q9UJ68	235 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	MTCH2	Q9Y6C9	303 aa		11.46	□□□□□ -0.57
MCF2L-223	ENST00000473345	TCF20	Q9UGU0	1960 aa	Known RBP	11.46	□□□□□ -0.58
MCF2L-223	ENST00000473345	LPXN	O60711	386 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	CA3	P07451	260 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	SLC16A2	P36021	539 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	NOV	P48745	357 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	STAT2	P52630	851 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	PURA	Q00577	322 aa	Known RBP	11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	PPARA	Q07869	468 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	VPS53	Q5VIR6	699 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	PPP2R2D	Q66LE6	453 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	ZSCAN25	Q6NSZ9	544 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	SLC30A10	Q6XR72	485 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	DEFB128	Q7Z7B8	93 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	SLC28A3	Q9HAS3	691 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	C11orf16	Q9NQ32	467 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	MTMR7	Q9Y216	660 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	PTPRS	Q13332	1948 aa		11.45	□□□□□ -0.58
MCF2L-223	ENST00000473345	LCHN	A4D1U4	455 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	APP	P05067	770 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	TSPY3	P0CV98	308 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	TSPY8	P0CW00	308 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	ATP2A2	P16615	1042 aa	Known RBP	11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	SLC1A4	P43007	532 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	BAAT	Q14032	418 aa	Predicted RBP	11.44	□□□□□ -0.58

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