RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 EDAQ92838 391 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 PPP1R9AQ9ULJ8 1098 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 NLRC5Q86WI3 1866 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 DNAJC25-GNG10A0A024R161 153 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 TMEM221A6NGB7 291 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 M0R296 226 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
CDHR3-209ENST00000472116 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 IDH1O75874 414 aaKnown RBP12.41□□□□□ -0.42
CDHR3-209ENST00000472116 TRIOO75962 3097 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 BFSP2Q13515 415 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 FAM47CQ5HY64 1035 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 PABPC5Q96DU9 382 aaKnown RBP12.41□□□□□ -0.42
CDHR3-209ENST00000472116 TRMT13Q9NUP7 481 aaKnown RBP12.41□□□□□ -0.42
CDHR3-209ENST00000472116 FBXO28Q9NVF7 368 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
CDHR3-209ENST00000472116 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 MYO7AQ13402 2215 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 TRIM67Q6ZTA4 783 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 RNF135Q8IUD6 432 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 MRPL38Q96DV4 380 aaKnown RBP12.4□□□□□ -0.42
CDHR3-209ENST00000472116 RAD9AQ99638 391 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 GPHNQ9NQX3 736 aaPredicted RBP12.4□□□□□ -0.42
CDHR3-209ENST00000472116 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
CDHR3-209ENST00000472116 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
CDHR3-209ENST00000472116 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
CDHR3-209ENST00000472116 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDHR3-209ENST00000472116 NBPF20Q3BBV1 942 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 POLR3EQ9NVU0 708 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 MCM9Q9NXL9 1143 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
CDHR3-209ENST00000472116 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 SCN10AQ9Y5Y9 1956 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
CDHR3-209ENST00000472116 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 ASB14A6NK59 587 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 NCK2O43639 380 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 ZBED4O75132 1171 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 GABPAQ06546 454 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
CDHR3-209ENST00000472116 FAM83BQ5T0W9 1011 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 CLEC10AQ8IUN9 316 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDHR3-209ENST00000472116 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
CDHR3-209ENST00000472116 Q9Y3F1 56 aa12.38□□□□□ -0.43
CDHR3-209ENST00000472116 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
CDHR3-209ENST00000472116 ASTN1O14525 1302 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 EFCAB14O75071 495 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 GJB5O95377 273 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
CDHR3-209ENST00000472116 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
CDHR3-209ENST00000472116 CHST13Q8NET6 341 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
CDHR3-209ENST00000472116 NSUN3Q9H649 340 aaKnown RBP12.37□□□□□ -0.43
CDHR3-209ENST00000472116 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
CDHR3-209ENST00000472116 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
CDHR3-209ENST00000472116 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 KDM4AO75164 1064 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 MYL3P08590 195 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 ZAP70P43403 619 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 CPT1AP50416 773 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 SMAD2Q15796 467 aaKnown RBP12.36□□□□□ -0.43
CDHR3-209ENST00000472116 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 TMCO2Q7Z6W1 182 aaPredicted RBP12.36□□□□□ -0.43
CDHR3-209ENST00000472116 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 SAMD11Q96NU1 681 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 KATNBL1Q9H079 304 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
CDHR3-209ENST00000472116 MAGEB6P1A0A0J9YX57 407 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 USP17L21D6R901 530 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 H0Y858 1186 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 STXBP3O00186 592 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
CDHR3-209ENST00000472116 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
CDHR3-209ENST00000472116 AKR1B1P15121 316 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 SMPD1P17405 629 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 DEFB103AP81534 67 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 TCEAL5Q5H9L2 206 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 FAM117BQ6P1L5 589 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 CNKSR3Q6P9H4 555 aa12.35□□□□□ -0.43
CDHR3-209ENST00000472116 PRPF38AQ8NAV1 312 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms