RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 NELFBQ8WX92 580 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 ABCD1P33897 745 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 IRX1P78414 480 aaPredicted RBP18.4■□□□□ 0.54
HOXB3-205ENST00000470495 KCTD1Q719H9 257 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 OGFOD1Q8N543 542 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.4■□□□□ 0.54
HOXB3-205ENST00000470495 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 SPAG1Q07617 926 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 DYMQ7RTS9 669 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 MED4Q9NPJ6 270 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 ODF2LQ9ULJ1 636 aa18.4■□□□□ 0.54
HOXB3-205ENST00000470495 TMEM232C9JQI7 657 aa18.39■□□□□ 0.54
HOXB3-205ENST00000470495 SBK1Q52WX2 424 aa18.39■□□□□ 0.54
HOXB3-205ENST00000470495 SPECC1LQ69YQ0 1117 aa18.39■□□□□ 0.54
HOXB3-205ENST00000470495 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.54
HOXB3-205ENST00000470495 LRWD1Q9UFC0 647 aa18.39■□□□□ 0.54
HOXB3-205ENST00000470495 AKR1B15C9JRZ8 316 aaPredicted RBP18.39■□□□□ 0.53
HOXB3-205ENST00000470495 ZYXQ15942 572 aaKnown RBP18.39■□□□□ 0.53
HOXB3-205ENST00000470495 KIF4BQ2VIQ3 1234 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 ARMC2Q8NEN0 867 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 CERKQ8TCT0 537 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 KIF5CO60282 957 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.53
HOXB3-205ENST00000470495 PAX3P23760 479 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 MRPL12P52815 198 aaKnown RBP18.39■□□□□ 0.53
HOXB3-205ENST00000470495 NEDD9Q14511 834 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 USH1GQ495M9 461 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 FKBP15Q5T1M5 1219 aa18.39■□□□□ 0.53
HOXB3-205ENST00000470495 TRAPPC10P48553 1259 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 CALCRLQ16602 461 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 SLC27A3Q5K4L6 730 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 TRIML1Q8N9V2 468 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 WHAMMQ8TF30 809 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 RSRC1Q96IZ7 334 aaKnown RBP18.38■□□□□ 0.53
HOXB3-205ENST00000470495 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 COA1Q9GZY4 146 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 CNTNAP5Q8WYK1 1306 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 GOLGA6L10A0A0M3HER8 536 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.38■□□□□ 0.53
HOXB3-205ENST00000470495 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 PPIP5K2O43314 1243 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 EARS2Q5JPH6 523 aaKnown RBP18.38■□□□□ 0.53
HOXB3-205ENST00000470495 DPF2Q92785 391 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 CUL5Q93034 780 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 SIPA1L3O60292 1781 aaPredicted RBP18.38■□□□□ 0.53
HOXB3-205ENST00000470495 OR52Z1P0C646 297 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 NPR1P16066 1061 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 TBCKQ8TEA7 893 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 DESI2Q9BSY9 194 aa18.38■□□□□ 0.53
HOXB3-205ENST00000470495 USP27XA6NNY8 438 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 ATRNO75882 1429 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 GPIHBP1Q8IV16 184 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 TMEM165Q9HC07 324 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 FLT1P17948 1338 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 RPN1P04843 607 aaKnown RBP18.37■□□□□ 0.53
HOXB3-205ENST00000470495 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
HOXB3-205ENST00000470495 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
HOXB3-205ENST00000470495 SNX29Q8TEQ0 813 aa18.37■□□□□ 0.53
HOXB3-205ENST00000470495 RPSAP08865 295 aaKnown RBP18.36■□□□□ 0.53
HOXB3-205ENST00000470495 RASA1P20936 1047 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 GRM4Q14833 912 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 PKN1Q16512 942 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 SPATA1Q5VX52 437 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 SV2BQ7L1I2 683 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 GSDMAQ96QA5 445 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 DAGLAQ9Y4D2 1042 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.36■□□□□ 0.53
HOXB3-205ENST00000470495 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
HOXB3-205ENST00000470495 FCHSD1Q86WN1 690 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 EBAG9O00559 213 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 MAGEA9P43362 315 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 SEPT14Q6ZU15 432 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 RASGRP2Q7LDG7 609 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 TSG101Q99816 390 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 RABEP2Q9H5N1 569 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 STK32BQ9NY57 414 aa18.36■□□□□ 0.53
HOXB3-205ENST00000470495 GDF11O95390 407 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 SLU7O95391 586 aaKnown RBP18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CCDC175P0C221 793 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CUL4BQ13620 913 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CERKLQ49MI3 558 aaPredicted RBP18.35■□□□□ 0.53
HOXB3-205ENST00000470495 MICALCLQ6ZW33 695 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CSGALNACT2Q8N6G5 542 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CCDC114Q96M63 670 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 ENO4A6NNW6 628 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 DDX41Q9UJV9 622 aaKnown RBP18.35■□□□□ 0.53
HOXB3-205ENST00000470495 SPDYE3A6NKU9 549 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 TTLL1O95922 423 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
HOXB3-205ENST00000470495 CCDC40Q4G0X9 1142 aa18.35■□□□□ 0.53
HOXB3-205ENST00000470495 AKR1B1P15121 316 aa18.34■□□□□ 0.53
HOXB3-205ENST00000470495 LRRC23Q53EV4 343 aaPredicted RBP18.34■□□□□ 0.53
HOXB3-205ENST00000470495 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
HOXB3-205ENST00000470495 ENOX1Q8TC92 643 aaKnown RBP18.34■□□□□ 0.53
HOXB3-205ENST00000470495 MORC3Q14149 939 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms