RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 A0A1W2PQ27 194 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 A0A1W2PQ64 194 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 A0A1W2PQD8 194 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 GNG11P61952 73 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 AOC3Q16853 763 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 FAM210AQ96ND0 272 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 ACBD3Q9H3P7 528 aa13.76□□□□□ -0.21
USP11-206ENST00000469080 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
USP11-206ENST00000469080 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
USP11-206ENST00000469080 LRP6O75581 1613 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
USP11-206ENST00000469080 MYBL2P10244 700 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 SNX1Q13596 522 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 PTPAQ15257 358 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 SEC23AQ15436 765 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 SH3GL3Q99963 347 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 A0A087X0B3 334 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 TEX33O43247 280 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 CALM1P0DP23 149 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 CALM2P0DP24 149 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 CALM3P0DP25 149 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 ZNF76P36508 570 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 FILIP1LQ4L180 1135 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 KCNV1Q6PIU1 500 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
USP11-206ENST00000469080 ZNF512BQ96KM6 892 aaPredicted RBP13.75□□□□□ -0.21
USP11-206ENST00000469080 BRIP1Q9BX63 1249 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 FAM107BQ9H098 131 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.75□□□□□ -0.21
USP11-206ENST00000469080 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 MYH2Q9UKX2 1941 aa13.75□□□□□ -0.21
USP11-206ENST00000469080 FAM205AQ6ZU69 1335 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 CHMP2AO43633 222 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 SORBS3O60504 671 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 PKN1Q16512 942 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ZFPM1Q8IX07 1006 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ARMC2Q8NEN0 867 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 TMEM60Q9H2L4 133 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 LEMD3Q9Y2U8 911 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ARID5AQ03989 594 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ADCY2Q08462 1091 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 KIF9Q9HAQ2 790 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 BAZ2AQ9UIF9 1905 aaKnown RBP13.74□□□□□ -0.21
USP11-206ENST00000469080 PPIP5K2O43314 1243 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 NEMFO60524 1076 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 N4BP1O75113 896 aaKnown RBP13.74□□□□□ -0.21
USP11-206ENST00000469080 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 ATP2B4P23634 1241 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 LRRC41Q15345 812 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 MAEAQ7L5Y9 396 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 FOXP1Q9H334 677 aaPredicted RBP13.74□□□□□ -0.21
USP11-206ENST00000469080 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 FBXO2Q9UK22 296 aaPredicted RBP13.74□□□□□ -0.21
USP11-206ENST00000469080 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
USP11-206ENST00000469080 CAPN7Q9Y6W3 813 aa13.74□□□□□ -0.21
USP11-206ENST00000469080 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 PPFIA4O75335 1185 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 PTPREP23469 700 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 TM4SF1P30408 202 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 PLS1Q14651 629 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
USP11-206ENST00000469080 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 ABCA3Q99758 1704 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 INPP5BP32019 993 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.73□□□□□ -0.21
USP11-206ENST00000469080 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 ZBTB21Q9ULJ3 1066 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 H0YIN7 160 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 SLC1A4P43007 532 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 MTF1Q14872 753 aa13.73□□□□□ -0.21
USP11-206ENST00000469080 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms