RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NTSR2O95665 410 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 KRT5P13647 590 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 CRKP46108 304 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 TERF1P54274 439 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 LRMPQ12912 555 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 FAM178BQ8IXR5 827 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 GOLGA5Q8TBA6 731 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 STK17AQ9UEE5 414 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 C21orf2O43822 256 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 BCRP11274 1271 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 EZRP15311 586 aaKnown RBP15.28■□□□□ 0.04
BRAT1-203ENST00000467558 STAT2P52630 851 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 C11orf57Q6ZUT1 292 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-203ENST00000467558 CCDC155Q8N6L0 562 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
BRAT1-203ENST00000467558 ZDHHC9Q9Y397 364 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 CIAPIN1Q6FI81 312 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 NLRC4Q9NPP4 1024 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 MTUS1Q9ULD2 1270 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 MEGF6O75095 1541 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 USP14P54578 494 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.04
BRAT1-203ENST00000467558 DCPSQ96C86 337 aaKnown RBP15.27■□□□□ 0.04
BRAT1-203ENST00000467558 ORC4O43929 436 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 PTPREP23469 700 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 GPSM2P81274 684 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 PFKFB3Q16875 520 aaPredicted RBP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 METTL14Q9HCE5 456 aaKnown RBP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 MYO3BQ8WXR4 1341 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 PABPC4Q13310 644 aaKnown RBP eCLIP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 MYRIPQ8NFW9 859 aa15.27■□□□□ 0.03
BRAT1-203ENST00000467558 NSUN4Q96CB9 384 aaKnown RBP15.27■□□□□ 0.03
BRAT1-203ENST00000467558 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 OPA1O60313 960 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CDC25BP30305 580 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-203ENST00000467558 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 SYDE2Q5VT97 1194 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 KAZALD1Q96I82 304 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 NAP1L3Q99457 506 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CARD6Q9BX69 1037 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 STX10O60499 249 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 ECM2O94769 699 aaPredicted RBP15.26■□□□□ 0.03
BRAT1-203ENST00000467558 TRPC3Q13507 836 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 SMC1AQ14683 1233 aaKnown RBP15.26■□□□□ 0.03
BRAT1-203ENST00000467558 SUPT20HL1Q3ZLR7 823 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CNTNAP4Q9C0A0 1308 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CDC27P30260 824 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 GJC1P36383 396 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 ENOX1Q8TC92 643 aaKnown RBP15.26■□□□□ 0.03
BRAT1-203ENST00000467558 GLG1Q92896 1179 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
BRAT1-203ENST00000467558 CDC25AP30304 524 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 DPH6Q7L8W6 267 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 CCDC91Q7Z6B0 441 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 WDR11Q9BZH6 1224 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 SIGLEC1Q9BZZ2 1709 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 KIF4AO95239 1232 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 ADAM9Q13443 819 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 XKR9Q5GH70 373 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 MAN1B1Q9UKM7 699 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 LMAN1P49257 510 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 FAM160B2Q86V87 743 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 RDH13Q8NBN7 331 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 EPSTI1Q96J88 318 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 SPOPO43791 374 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 ZNF658Q5TYW1 1059 aaPredicted RBP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 ZNF579Q8NAF0 562 aaKnown RBP15.25■□□□□ 0.03
BRAT1-203ENST00000467558 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 CCDC77Q9BR77 488 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
BRAT1-203ENST00000467558 ASNSP08243 561 aa15.24■□□□□ 0.03
BRAT1-203ENST00000467558 CDC37Q16543 378 aaPredicted RBP15.24■□□□□ 0.03
BRAT1-203ENST00000467558 EAPPQ56P03 285 aaPredicted RBP15.24■□□□□ 0.03
BRAT1-203ENST00000467558 SMIM5Q71RC9 77 aa15.24■□□□□ 0.03
BRAT1-203ENST00000467558 GRAMD1CQ8IYS0 662 aa15.24■□□□□ 0.03
BRAT1-203ENST00000467558 H0YCG3 227 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms