RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 EIF4A1P60842 406 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 FANCCQ00597 558 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 POU4F2Q12837 409 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 AIMP1Q12904 312 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 PSMD2Q13200 908 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 ADGRE1Q14246 886 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 MAP3K21Q5TCX8 1036 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 DCAF15Q66K64 600 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 LYSMD3Q7Z3D4 306 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 LRP10Q7Z4F1 713 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 HERVK_113Q902F9 699 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 PHACTR3Q96KR7 559 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 TMEM39BQ9GZU3 492 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 PANK3Q9H999 370 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 ZNF70Q9UC06 446 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 ATP11BQ9Y2G3 1177 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 AK5Q9Y6K8 562 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 CHD9Q3L8U1 2897 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 SPTBN2O15020 2390 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 AOX1Q06278 1338 aa5.2□□□□□ -1.58
ECHDC1-211ENST00000460558 USP34Q70CQ2 3546 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 GPR179Q6PRD1 2367 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 DOCK2Q92608 1830 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 TCP10L2B9ZVM9 353 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CPNE3O75131 537 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CTSHP09668 335 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 ALADP13716 330 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 MSX1P28360 303 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 PHKA2P46019 1235 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 TYRO3Q06418 890 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 MOGSQ13724 837 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 DCTN1Q14203 1278 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 FAM110CQ1W6H9 321 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 SAMD5Q5TGI4 173 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 GPAT2Q6NUI2 795 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CCDC129Q6ZRS4 1044 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 FASTKD5Q7L8L6 764 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 TXNRD3Q86VQ6 643 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 MICALL1Q8N3F8 863 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CERS5Q8N5B7 392 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 SNX29Q8TEQ0 813 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 XAGE3Q8WTP9 111 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 TRIB2Q92519 343 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CRELD1Q96HD1 420 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 CDC5LQ99459 802 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 MRS2Q9HD23 443 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 COG5Q9UP83 839 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 SLC45A1Q9Y2W3 748 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 KNSTRNQ9Y448 316 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 DOCK1Q14185 1865 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 SMCHD1A6NHR9 2005 aa5.19□□□□□ -1.58
ECHDC1-211ENST00000460558 C5orf42Q9H799 3197 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 RPAP1Q9BWH6 1393 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 TECTAO75443 2155 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 CHD7Q9P2D1 2997 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 A6NHS1 94 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 TTLL8A6PVC2 850 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 CXCL11O14625 94 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 GIPC1O14908 333 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 GFRA3O60609 400 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 ANXA1P04083 346 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 BMP2P12643 396 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 EIF2S2P20042 333 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 FKBP1AP62942 108 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 PROSER3Q2NL68 480 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 PRICKLE2Q7Z3G6 844 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 CRIPAKQ8N1N5 446 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 ANKRD13CQ8N6S4 541 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 SREK1Q8WXA9 508 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 ZNF341Q9BYN7 854 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 TDRD3Q9H7E2 651 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 PDLIM7Q9NR12 457 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 MINPP1Q9UNW1 487 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 FNDC3AQ9Y2H6 1198 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 LEMD3Q9Y2U8 911 aa5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 MYBBP1AQ9BQG0 1328 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-211ENST00000460558 EP300Q09472 2414 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 LOC285556D6RIA3 1793 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 XIRP2A4UGR9 3374 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 A0A1W2PNR3 127 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 DNM1LO00429 736 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 XRCC5P13010 732 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 ZKSCAN1P17029 563 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 CYP2B6P20813 491 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 ERCC5P28715 1186 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 KCNJ4P48050 445 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 FPGSQ05932 587 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 CACNB2Q08289 660 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 RAB30Q15771 203 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 CTC1Q2NKJ3 1217 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 C8orf34Q49A92 452 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 GADL1Q6ZQY3 521 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 TRIM46Q7Z4K8 759 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 NLRP8Q86W28 1048 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 DZIP1LQ8IYY4 767 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 TMEM87AQ8NBN3 555 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 PLBD2Q8NHP8 589 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 ISCA1Q9BUE6 129 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 PBX4Q9BYU1 374 aa5.17□□□□□ -1.58
ECHDC1-211ENST00000460558 CHRDQ9H2X0 955 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms