RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 TSKSQ9UJT2 592 aa11.57□□□□□ -0.56
VPS45-204ENST00000460366 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
VPS45-204ENST00000460366 KLRF2D3W0D1 207 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 ZBTB43O43298 467 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 SLC25A27O95847 323 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 GNRH1P01148 92 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 LACTBP83111 547 aaPredicted RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 TMEM132BQ14DG7 1078 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 Q3C1V9 767 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 FANCBQ8NB91 859 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 NUP133Q8WUM0 1156 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 BRF1Q92994 677 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 KIF2CQ99661 725 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 SPATC1LQ9H0A9 340 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 RANBP17Q9H2T7 1088 aaKnown RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 BRPF3Q9ULD4 1205 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 ISY1Q9ULR0 285 aaKnown RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 CTDP1Q9Y5B0 961 aaPredicted RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 RLFQ13129 1914 aa11.56□□□□□ -0.56
VPS45-204ENST00000460366 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
VPS45-204ENST00000460366 KLF18A0A0U1RQI7 1052 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 GOLGA8HP0CJ92 632 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 COL9A1P20849 921 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 MAPK4P31152 587 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 SLC16A2P36021 539 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 STAT3P40763 770 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 NEK4P51957 841 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 FCGRTP55899 365 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 TOB2Q14106 344 aaPredicted RBP11.55□□□□□ -0.56
VPS45-204ENST00000460366 RABEP1Q15276 862 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 TKFCQ3LXA3 575 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 RASGRP2Q7LDG7 609 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 RIOX2Q8IUF8 465 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 STAG2Q8N3U4 1231 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 MTMR8Q96EF0 704 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 SPZ1Q9BXG8 430 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 UBA5Q9GZZ9 404 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 MROH8Q9H579 483 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 RIOX1Q9H6W3 641 aa11.55□□□□□ -0.56
VPS45-204ENST00000460366 ZNF214Q9UL59 606 aaPredicted RBP11.55□□□□□ -0.56
VPS45-204ENST00000460366 NID2Q14112 1375 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 HOXD10P28358 340 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
VPS45-204ENST00000460366 PSMC4P43686 418 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 PRMT2P55345 433 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 APOBRQ0VD83 1088 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 TRAF1Q13077 416 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS45-204ENST00000460366 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 EPAS1Q99814 870 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 MYL10Q9BUA6 226 aa11.54□□□□□ -0.56
VPS45-204ENST00000460366 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
VPS45-204ENST00000460366 STRNO43815 780 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 ICAM1P05362 532 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 RTN1Q16799 776 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 MICU3Q86XE3 530 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 CCAR1Q8IX12 1150 aaKnown RBP11.53□□□□□ -0.56
VPS45-204ENST00000460366 ABRAQ8N0Z2 381 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 CHST13Q8NET6 341 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 MAF1Q9H063 256 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 JMJD4Q9H9V9 463 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
VPS45-204ENST00000460366 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 ZNF536O15090 1300 aa11.53□□□□□ -0.56
VPS45-204ENST00000460366 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 CYTH3O43739 400 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 PEX10O60683 326 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
VPS45-204ENST00000460366 ERCC3P19447 782 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 METAP2P50579 478 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS45-204ENST00000460366 AK2P54819 239 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 PLS1Q14651 629 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
VPS45-204ENST00000460366 SLC35G1Q2M3R5 365 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 SNRNP48Q6IEG0 339 aaKnown RBP11.52□□□□□ -0.57
VPS45-204ENST00000460366 PLEKHH3Q7Z736 793 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 CPXCR1Q8N123 301 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 SRBD1Q8N5C6 995 aaKnown RBP11.52□□□□□ -0.57
VPS45-204ENST00000460366 COA7Q96BR5 231 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 PORCNQ9H237 461 aa11.52□□□□□ -0.57
VPS45-204ENST00000460366 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
VPS45-204ENST00000460366 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 PNMA6FA0A0J9YX94 578 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 SLC15A5A6NIM6 579 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 PPP1R3GB7ZBB8 358 aa11.51□□□□□ -0.57
VPS45-204ENST00000460366 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms