RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DUSP9Q99956 384 aaKnown RBP21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 NOC4LQ9BVI4 516 aaKnown RBP21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 LRWD1Q9UFC0 647 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 RNF40O75150 1001 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 KCTD19Q17RG1 926 aaPredicted RBP21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 HAUS4Q9H6D7 363 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 MLXIPQ9HAP2 919 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 EXOC1Q9NV70 894 aa21.9■■□□□ 1.1
CNEP1R1-203ENST00000458059 RASSF10A6NK89 507 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 MYO1CO00159 1063 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 ORC4O43929 436 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 TTI2Q6NXR4 508 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 CABP7Q86V35 215 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 GOLGA5Q8TBA6 731 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 ZNF507Q8TCN5 953 aa21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 ZNHIT6Q9NWK9 470 aaKnown RBP21.89■■□□□ 1.1
CNEP1R1-203ENST00000458059 PLCH1Q4KWH8 1693 aa21.89■■□□□ 1.09
CNEP1R1-203ENST00000458059 ZPR1O75312 459 aa21.89■■□□□ 1.09
CNEP1R1-203ENST00000458059 PPARDQ03181 441 aa21.89■■□□□ 1.09
CNEP1R1-203ENST00000458059 CAPN11Q9UMQ6 739 aa21.89■■□□□ 1.09
CNEP1R1-203ENST00000458059 USP14P54578 494 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 NAPAP54920 295 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 RPS8P62241 208 aaKnown RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 SLC7A5Q01650 507 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 XIRP1Q702N8 1843 aaKnown RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 EPHB6O15197 1021 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 FGRP09769 529 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 ENOX2Q16206 610 aaKnown RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 ARL6IP4Q66PJ3 421 aaKnown RBP21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 USP17L2Q6R6M4 530 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 HDAC7Q8WUI4 952 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 DNAJC7Q99615 494 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 POLD4Q9HCU8 107 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 MAD2L2Q9UI95 211 aa21.88■■□□□ 1.09
CNEP1R1-203ENST00000458059 TXKP42681 527 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 GBP3Q9H0R5 595 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 PDS5AQ29RF7 1337 aaKnown RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 MYH10P35580 1976 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 KRT86O43790 486 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 C2CD5Q86YS7 1000 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 CCDC155Q8N6L0 562 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 UBA5Q9GZZ9 404 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 MMRN2Q9H8L6 949 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 MYO1AQ9UBC5 1043 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 BIN2Q9UBW5 565 aaPredicted RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 DNAJC21Q5F1R6 531 aaKnown RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 TTC19Q6DKK2 380 aaPredicted RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 PTF1AQ7RTS3 328 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 FBXO33Q7Z6M2 555 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 GJA10Q969M2 543 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 TMEM260Q9NX78 707 aa21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 ARPP21Q9UBL0 812 aaPredicted RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 RRP15Q9Y3B9 282 aaKnown RBP21.87■■□□□ 1.09
CNEP1R1-203ENST00000458059 DNM2P50570 870 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 GIMAP8Q8ND71 665 aaPredicted RBP21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 ATP8A2Q9NTI2 1148 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 TCP11L1Q9NUJ3 509 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 CAPN6Q9Y6Q1 641 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 PSMD14O00487 310 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 ZNF263O14978 683 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 MOCS3O95396 460 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 EEF1GP26641 437 aaKnown RBP21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 LRRC41Q15345 812 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 MUM1L1Q5H9M0 696 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 ZNF444Q8N0Y2 327 aaPredicted RBP21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 P2RX5Q93086 422 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 CCDC42Q96M95 316 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 KANSL2Q9H9L4 492 aa21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 CWC15Q9P013 229 aaKnown RBP21.86■■□□□ 1.09
CNEP1R1-203ENST00000458059 NCK2O43639 380 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 CYLC1P35663 651 aaPredicted RBP21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 GGCXP38435 758 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 COG1Q8WTW3 980 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 PYM1Q9BRP8 204 aaKnown RBP21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 GOLGA6L1Q8N7Z2 621 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 TRIM9Q9C026 710 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 DEF6Q9H4E7 631 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 ANKIB1Q9P2G1 1089 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 NHSL1Q5SYE7 1610 aa21.85■■□□□ 1.09
CNEP1R1-203ENST00000458059 STXBP3O00186 592 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 SRGNP10124 158 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 KRT83P78385 493 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 TUBB2AQ13885 445 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 NBPF5PQ86XG9 351 aaPredicted RBP21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 LINC00116Q8NCU8 138 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 GLIS3Q8NEA6 775 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 TMEM47Q9BQJ4 181 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 TUBB2BQ9BVA1 445 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 THAP9Q9H5L6 903 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 KBTBD4Q9NVX7 518 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 RHOBTB3O94955 611 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 SYF2O95926 243 aaKnown RBP21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 NAP1L1P55209 391 aaKnown RBP21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 EIF6P56537 245 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms