RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 ASTN1O14525 1302 aa16.69■□□□□ 0.26
SHANK2-209ENST00000445654 GRIN2DO15399 1336 aa16.69■□□□□ 0.26
SHANK2-209ENST00000445654 ZNF316A6NFI3 1004 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-209ENST00000445654 PITPNM1O00562 1244 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 NDUFB10O96000 172 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 KCNJ6P48051 423 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
SHANK2-209ENST00000445654 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-209ENST00000445654 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 DEFB128Q7Z7B8 93 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 GJD3Q8N144 294 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 TMEM57Q8N5G2 664 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
SHANK2-209ENST00000445654 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
SHANK2-209ENST00000445654 MKNK2Q9HBH9 465 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 TNKSO95271 1327 aa16.68■□□□□ 0.26
SHANK2-209ENST00000445654 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.67■□□□□ 0.26
SHANK2-209ENST00000445654 ADD2P35612 726 aa16.67■□□□□ 0.26
SHANK2-209ENST00000445654 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
SHANK2-209ENST00000445654 CLASRPQ8N2M8 674 aaKnown RBP16.67■□□□□ 0.26
SHANK2-209ENST00000445654 KHSRPQ92945 711 aaKnown RBP eCLIP16.67■□□□□ 0.266e-7■■■□□ 16.4
SHANK2-209ENST00000445654 SNX27Q96L92 541 aa16.67■□□□□ 0.26
SHANK2-209ENST00000445654 UIMC1Q96RL1 719 aa16.67■□□□□ 0.26
SHANK2-209ENST00000445654 FTOQ9C0B1 505 aaKnown RBP eCLIP16.67■□□□□ 0.26
SHANK2-209ENST00000445654 VTA1Q9NP79 307 aa16.67■□□□□ 0.26
SHANK2-209ENST00000445654 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
SHANK2-209ENST00000445654 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-209ENST00000445654 EPOPA6NHQ4 379 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 PRKAB2O43741 272 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 SMPD1P17405 629 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 CPT1AP50416 773 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 BFSP2Q13515 415 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 FAM178BQ8IXR5 827 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 CCDC155Q8N6L0 562 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 VWCEQ96DN2 955 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
SHANK2-209ENST00000445654 ZNF536O15090 1300 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
SHANK2-209ENST00000445654 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
SHANK2-209ENST00000445654 PSMC6P62333 389 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 PTPN11Q06124 597 aaPredicted RBP16.65■□□□□ 0.26
SHANK2-209ENST00000445654 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
SHANK2-209ENST00000445654 LEXMQ3ZCV2 418 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 KRT40Q6A162 431 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 CHURC1Q8WUH1 139 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 A1CFQ9NQ94 594 aaKnown RBP16.65■□□□□ 0.26
SHANK2-209ENST00000445654 HOMER2Q9NSB8 354 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 FAM50BQ9Y247 325 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 SLC4A4Q9Y6R1 1079 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 RAD50Q92878 1312 aa16.65■□□□□ 0.26
SHANK2-209ENST00000445654 LOC102724159A0A0B4J2E5 919 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 KPNA6O60684 536 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 IFIT2P09913 472 aaKnown RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 CYP2C9P11712 490 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 NHLH1Q02575 133 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 PWP2Q15269 919 aaKnown RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 UBE3CQ15386 1083 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 GMCL1P1Q8NEA9 526 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 MKL1Q969V6 931 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 MTG1Q9BT17 334 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 ZBED2Q9BTP6 218 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 CLIP2Q9UDT6 1046 aa16.64■□□□□ 0.25
SHANK2-209ENST00000445654 COL4A4P53420 1690 aaPredicted RBP16.64■□□□□ 0.25
SHANK2-209ENST00000445654 TANC1Q9C0D5 1861 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 MYH4Q9Y623 1939 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.63■□□□□ 0.25
SHANK2-209ENST00000445654 PARNO95453 639 aaKnown RBP16.63■□□□□ 0.25
SHANK2-209ENST00000445654 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 BMP3P12645 472 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 DUSP28Q4G0W2 176 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 CD320Q9NPF0 282 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
SHANK2-209ENST00000445654 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 EXOC6BQ9Y2D4 811 aa16.63■□□□□ 0.25
SHANK2-209ENST00000445654 SOWAHBA6NEL2 793 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 LPXNO60711 386 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 EFCAB14O75071 495 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 RASA1P20936 1047 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 STAT2P52630 851 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 GIMAP6Q6P9H5 292 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 RHPN1Q8TCX5 695 aa16.62■□□□□ 0.25
SHANK2-209ENST00000445654 KIF1BPQ96EK5 621 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms