RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF865P0CJ78 1059 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 NOVP48745 357 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 MAMDC4Q6UXC1 1216 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 LENG1Q96BZ8 264 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 GDF15Q99988 308 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 DSCC1Q9BVC3 393 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 UBE2OQ9C0C9 1292 aaKnown RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 PRO3102Q9H379 93 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 A1CFQ9NQ94 594 aaKnown RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.27□□□□□ -0.77
USP6NL-203ENST00000443016 ZNF536O15090 1300 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 NEDD4P46934 1319 aa10.27□□□□□ -0.77
USP6NL-203ENST00000443016 SNAI1O95863 264 aaPredicted RBP10.26□□□□□ -0.77
USP6NL-203ENST00000443016 PDHBP11177 359 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 RTP1P59025 263 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 CNTN2Q02246 1040 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 ACVR2BQ13705 512 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 SYDE2Q5VT97 1194 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 NOL8Q76FK4 1167 aaKnown RBP10.26□□□□□ -0.77
USP6NL-203ENST00000443016 ARMCX2Q7L311 632 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 CCDC144CPQ8IYA2 1237 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 RUFY2Q8WXA3 655 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 SPC25Q9HBM1 224 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 PRDM5Q9NQX1 630 aaPredicted RBP10.26□□□□□ -0.77
USP6NL-203ENST00000443016 PCDH10Q9P2E7 1040 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 SMCHD1A6NHR9 2005 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 A0A0C4DFX4 3053 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 B4E1Z4 1266 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 ICAM1P05362 532 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 NT5C2P49902 561 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 CCDC178Q5BJE1 867 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 BMP2KLQ5H9B9 411 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 SLC39A5Q6ZMH5 540 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 SKAP1Q86WV1 359 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 ZNF592Q92610 1267 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 KAT14Q9H8E8 782 aa10.26□□□□□ -0.77
USP6NL-203ENST00000443016 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 C6orf222P0C671 652 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-203ENST00000443016 GSPT1P15170 499 aaKnown RBP10.25□□□□□ -0.77
USP6NL-203ENST00000443016 BMP8BP34820 402 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 DGKHQ86XP1 1220 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 UBAC1Q9BSL1 405 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 KRT23Q9C075 422 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 CNNM2Q9H8M5 875 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 ASB14A6NK59 587 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 GOLGA8HP0CJ92 632 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 ZNF543Q08ER8 600 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 TRDNQ13061 729 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 TRIM60Q495X7 471 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 MUM1L1Q5H9M0 696 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 FAM133AQ8N9E0 248 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 RANBP17Q9H2T7 1088 aaKnown RBP10.25□□□□□ -0.77
USP6NL-203ENST00000443016 PLXNA1Q9UIW2 1896 aa10.25□□□□□ -0.77
USP6NL-203ENST00000443016 COL6A3P12111 3177 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 SYNRGQ9UMZ2 1314 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
USP6NL-203ENST00000443016 DUSP11O75319 330 aaKnown RBP10.24□□□□□ -0.77
USP6NL-203ENST00000443016 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
USP6NL-203ENST00000443016 BTNL9Q6UXG8 535 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 TDHQ8IZJ6 230 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 NUP133Q8WUM0 1156 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
USP6NL-203ENST00000443016 CYP39A1Q9NYL5 469 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 ZSWIM5Q9P217 1185 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 PNMA2Q9UL42 364 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 PHF24Q9UPV7 400 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 FRMPD3Q5JV73 1810 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 TNKSO95271 1327 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 EEPD1Q7L9B9 569 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 STARD7Q9NQZ5 370 aa10.24□□□□□ -0.77
USP6NL-203ENST00000443016 ADD3Q9UEY8 706 aaKnown RBP10.24□□□□□ -0.77
USP6NL-203ENST00000443016 RAD50Q92878 1312 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 A0A1W2PQ45 241 aaPredicted RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 A0A1W2PQY0 241 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 SOWAHBA6NEL2 793 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 PQBP1O60828 265 aaKnown RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 ADAMTS4O75173 837 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 GNASQ5JWF2 1037 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 CASC1Q6TDU7 716 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 PCSK9Q8NBP7 692 aaKnown RBP10.23□□□□□ -0.77
USP6NL-203ENST00000443016 FGD4Q96M96 766 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 GLT1D1Q96MS3 346 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 IL25Q9H293 177 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 STK25O00506 426 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 NFIBO00712 420 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 SNHG28P0DPA3 235 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 CALML3P27482 149 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 ACLYP53396 1101 aa10.23□□□□□ -0.77
USP6NL-203ENST00000443016 TNFAIP2Q03169 654 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms