RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PFASO15067 1338 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 TROAPQ12815 778 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 GRM4Q14833 912 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 KCNB2Q92953 911 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 MTA3Q9BTC8 594 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 ACAD9Q9H845 621 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 RBM27Q9P2N5 1060 aaKnown RBP20.59■□□□□ 0.89
CCDC188-201ENST00000439765 FBXO40Q9UH90 709 aa20.59■□□□□ 0.89
CCDC188-201ENST00000439765 CCDC69A6NI79 296 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 KLRF2D3W0D1 207 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 CYBAP13498 195 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 CPA1P15085 419 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 CYP2C19P33261 490 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 CDC37Q16543 378 aaPredicted RBP20.58■□□□□ 0.89
CCDC188-201ENST00000439765 ADGRF4Q8IZF3 695 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 DDX11Q96FC9 970 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 SLC5A4Q9NY91 659 aa20.58■□□□□ 0.89
CCDC188-201ENST00000439765 DDX20Q9UHI6 824 aaKnown RBP20.58■□□□□ 0.89
CCDC188-201ENST00000439765 LRRC37A2A6NM11 1700 aa20.58■□□□□ 0.88
CCDC188-201ENST00000439765 RXRAP19793 462 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 USH1GQ495M9 461 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 DHX32Q7L7V1 743 aaKnown RBP20.57■□□□□ 0.88
CCDC188-201ENST00000439765 RAB11FIP4Q86YS3 637 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 MAML3Q96JK9 1138 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 VAT1LQ9HCJ6 419 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 WDR19Q8NEZ3 1342 aa20.57■□□□□ 0.88
CCDC188-201ENST00000439765 PALM3A6NDB9 673 aaPredicted RBP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 DDAH1O94760 285 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 LIFRP42702 1097 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 RBM25P49756 843 aaKnown RBP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 TKFCQ3LXA3 575 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 TRPV1Q8NER1 839 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 JMJD4Q9H9V9 463 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 A1CFQ9NQ94 594 aaKnown RBP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 A0A1W2PPC1 479 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 HMGB1P09429 215 aaKnown RBP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 EXOSC10Q01780 885 aaKnown RBP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 ZNF792Q3KQV3 632 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC188-201ENST00000439765 MICU3Q86XE3 530 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 CCDC144CPQ8IYA2 1237 aa20.56■□□□□ 0.88
CCDC188-201ENST00000439765 DNAH12Q6ZR08 3092 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 NFIBO00712 420 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
CCDC188-201ENST00000439765 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 QRICH1Q2TAL8 776 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 NSMFQ6X4W1 530 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 C7orf61Q8IZ16 206 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 TMTC2Q8N394 836 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 CTCFLQ8NI51 663 aaPredicted RBP20.55■□□□□ 0.88
CCDC188-201ENST00000439765 SLC12A7Q9Y666 1083 aa20.55■□□□□ 0.88
CCDC188-201ENST00000439765 SZT2Q5T011 3432 aa20.54■□□□□ 0.88
CCDC188-201ENST00000439765 FGD1P98174 961 aa20.54■□□□□ 0.88
CCDC188-201ENST00000439765 SGMS1Q86VZ5 419 aa20.54■□□□□ 0.88
CCDC188-201ENST00000439765 HOMER1Q86YM7 354 aa20.54■□□□□ 0.88
CCDC188-201ENST00000439765 CNGA1P29973 690 aa20.53■□□□□ 0.88
CCDC188-201ENST00000439765 ANAPC15P60006 121 aa20.53■□□□□ 0.88
CCDC188-201ENST00000439765 CNTN2Q02246 1040 aa20.53■□□□□ 0.88
CCDC188-201ENST00000439765 GDF15Q99988 308 aa20.53■□□□□ 0.88
CCDC188-201ENST00000439765 LAMA3Q16787 3333 aa20.53■□□□□ 0.88
CCDC188-201ENST00000439765 POTEB2H3BUK9 544 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 SEPT4O43236 478 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 CYTH3O43739 400 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 KIF5BP33176 963 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 APOA5Q6Q788 366 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 PIBF1Q8WXW3 757 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 FGD4Q96M96 766 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 CYP39A1Q9NYL5 469 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 DIS3Q9Y2L1 958 aaKnown RBP20.52■□□□□ 0.88
CCDC188-201ENST00000439765 LTBP2Q14767 1821 aa20.52■□□□□ 0.88
CCDC188-201ENST00000439765 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 DNM1LO00429 736 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 CALM1P0DP23 149 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 CALM2P0DP24 149 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 CALM3P0DP25 149 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 RPS6KB1P23443 525 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 PSMA5P28066 241 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 SLC30A10Q6XR72 485 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 Q6ZUG5 572 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 CLEC4DQ8WXI8 215 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 PIGSQ96S52 555 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 MAP3K14Q99558 947 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 TINF2Q9BSI4 451 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 BRPF3Q9ULD4 1205 aa20.51■□□□□ 0.87
CCDC188-201ENST00000439765 NAP1L2Q9ULW6 460 aaPredicted RBP20.51■□□□□ 0.87
CCDC188-201ENST00000439765 KLF18A0A0U1RQI7 1052 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 ZBTB5O15062 677 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 PPP1R11O60927 126 aaPredicted RBP20.5■□□□□ 0.87
CCDC188-201ENST00000439765 BMP8BP34820 402 aa20.5■□□□□ 0.87
CCDC188-201ENST00000439765 LRRC26Q2I0M4 334 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms