RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 PPP1R13LQ8WUF5 828 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 MYLIPQ8WY64 445 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 CDX2Q99626 313 aaPredicted RBP9.74□□□□□ -0.85
RPE-211ENST00000438265 LBHD1Q9BQE6 289 aaPredicted RBP9.74□□□□□ -0.85
RPE-211ENST00000438265 TEX13BQ9BXU2 312 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 SEMA6BQ9H3T3 888 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 TCP11L1Q9NUJ3 509 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
RPE-211ENST00000438265 ZHX1Q9UKY1 873 aaPredicted RBP9.74□□□□□ -0.85
RPE-211ENST00000438265 GRIN2DO15399 1336 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 UMODL1Q5DID0 1318 aa9.74□□□□□ -0.85
RPE-211ENST00000438265 GRXCR1A8MXD5 290 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 KIAA0355O15063 1070 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 CLTBP09497 229 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 AKR1A1P14550 325 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 MCCP23508 829 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 NOVP48745 357 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 CDK7P50613 346 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 TFAP4Q01664 338 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 ACVR2BQ13705 512 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 SLFN13Q68D06 897 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 MFSD6Q6ZSS7 791 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 CCDC144CPQ8IYA2 1237 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 FAM133AQ8N9E0 248 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 GMCL1P1Q8NEA9 526 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 ESR2Q92731 530 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 MAP4K1Q92918 833 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 IL25Q9H293 177 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 A1CFQ9NQ94 594 aaKnown RBP9.73□□□□□ -0.85
RPE-211ENST00000438265 PDGFCQ9NRA1 345 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 TBX21Q9UL17 535 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
RPE-211ENST00000438265 COL4A4P53420 1690 aaPredicted RBP9.73□□□□□ -0.85
RPE-211ENST00000438265 TSPY2A6NKD2 308 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 TMEM232C9JQI7 657 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 TTLL1O95922 423 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 PBX2P40425 430 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 ANKRD33Q7Z3H0 272 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 TTC14Q96N46 770 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.72□□□□□ -0.85
RPE-211ENST00000438265 KRT23Q9C075 422 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 UPF3AQ9H1J1 476 aaKnown RBP9.72□□□□□ -0.85
RPE-211ENST00000438265 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 NRBP1Q9UHY1 535 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
RPE-211ENST00000438265 DUSP11O75319 330 aaKnown RBP9.71□□□□□ -0.86
RPE-211ENST00000438265 REC8O95072 547 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 ASGR1P07306 291 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 ACRP10323 421 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 BMP3P12645 472 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 SLC16A2P36021 539 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 TRDNQ13061 729 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 GRIN2CQ14957 1233 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 CCDC174Q6PII3 467 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
RPE-211ENST00000438265 RNF180Q86T96 592 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.71□□□□□ -0.86
RPE-211ENST00000438265 DDX11Q96FC9 970 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 MTA3Q9BTC8 594 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 LSG1Q9H089 658 aaKnown RBP9.71□□□□□ -0.86
RPE-211ENST00000438265 RNF146Q9NTX7 359 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 SLC5A4Q9NY91 659 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 FEM1BQ9UK73 627 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 PRR12Q9ULL5 1215 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 GNEQ9Y223 722 aaKnown RBP9.71□□□□□ -0.86
RPE-211ENST00000438265 LOXHD1Q8IVV2 1947 aa9.71□□□□□ -0.86
RPE-211ENST00000438265 SIP14410 1827 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 RANBP6O60518 1105 aaKnown RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 ZBED4O75132 1171 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 CD4P01730 458 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 CYP21A2P08686 494 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 C6orf222P0C671 652 aaPredicted RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 ALAS1P13196 640 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 SMPD1P17405 629 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 CST5P28325 142 aaPredicted RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 CYP2C18P33260 490 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 GJA9P57773 515 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 PSMC6P62333 389 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 SMAD3P84022 425 aaKnown RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 TMEM240Q5SV17 173 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 RCSD1Q6JBY9 416 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 TAPT1Q6NXT6 567 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 EEPD1Q7L9B9 569 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 IQCA1Q86XH1 822 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 DGKHQ86XP1 1220 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 FBXO16Q8IX29 292 aaPredicted RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 FAM126BQ8IXS8 530 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 ANKRD35Q8N283 1001 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 RNPC3Q96LT9 517 aaKnown RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
RPE-211ENST00000438265 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
RPE-211ENST00000438265 CPVLQ9H3G5 476 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms