RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PDHBP11177 359 aa20.17■□□□□ 0.82
CPSF4-203ENST00000430038 FAAP100Q0VG06 881 aa20.17■□□□□ 0.82
CPSF4-203ENST00000430038 GPR153Q6NV75 609 aa20.17■□□□□ 0.82
CPSF4-203ENST00000430038 TSEN34Q9BSV6 310 aaKnown RBP20.17■□□□□ 0.82
CPSF4-203ENST00000430038 MTMR10Q9NXD2 777 aa20.17■□□□□ 0.82
CPSF4-203ENST00000430038 CDH23Q9H251 3354 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 PQBP1O60828 265 aaKnown RBP20.16■□□□□ 0.82
CPSF4-203ENST00000430038 ICAM1P05362 532 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 CST5P28325 142 aaPredicted RBP20.16■□□□□ 0.82
CPSF4-203ENST00000430038 GJA9P57773 515 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 BEX3Q00994 111 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 SYDE2Q5VT97 1194 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 CPVLQ9H3G5 476 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
CPSF4-203ENST00000430038 NFIBO00712 420 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 ASGR1P07306 291 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 C6orf222P0C671 652 aaPredicted RBP20.15■□□□□ 0.82
CPSF4-203ENST00000430038 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 CDK7P50613 346 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 TAPT1Q6NXT6 567 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 EEPD1Q7L9B9 569 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 CLEC4DQ8WXI8 215 aa20.15■□□□□ 0.82
CPSF4-203ENST00000430038 GNEQ9Y223 722 aaKnown RBP20.15■□□□□ 0.82
CPSF4-203ENST00000430038 KIAA0355O15063 1070 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 CLTBP09497 229 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 NKX3-2P78367 333 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.81
CPSF4-203ENST00000430038 ZNF543Q08ER8 600 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 BAATQ14032 418 aaPredicted RBP20.14■□□□□ 0.81
CPSF4-203ENST00000430038 NSMFQ6X4W1 530 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 ANKRD33Q7Z3H0 272 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 STARD7Q9NQZ5 370 aa20.14■□□□□ 0.81
CPSF4-203ENST00000430038 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 GOLGA8HP0CJ92 632 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 GSPT1P15170 499 aaKnown RBP20.13■□□□□ 0.81
CPSF4-203ENST00000430038 SMPD1P17405 629 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 TNFAIP2Q03169 654 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 FBXO16Q8IX29 292 aaPredicted RBP20.13■□□□□ 0.81
CPSF4-203ENST00000430038 MORC4Q8TE76 937 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 TTC14Q96N46 770 aa20.13■□□□□ 0.81
CPSF4-203ENST00000430038 EYSQ5T1H1 3165 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 ZNF213O14771 459 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 KDM4AO75164 1064 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 MYH6P13533 1939 aa20.12■□□□□ 0.81
CPSF4-203ENST00000430038 GRIN2DO15399 1336 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 ASB14A6NK59 587 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 B4E1Z4 1266 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 SLC30A10Q6XR72 485 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 FAM161BQ96MY7 647 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 TOX2Q96NM4 488 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 GUCD1Q96NT3 240 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 TMEM39AQ9NV64 488 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 ZSWIM5Q9P217 1185 aa20.11■□□□□ 0.81
CPSF4-203ENST00000430038 ELP1O95163 1332 aa20.1■□□□□ 0.81
CPSF4-203ENST00000430038 PCP11498 1178 aaKnown RBP20.1■□□□□ 0.81
CPSF4-203ENST00000430038 TBC1D5Q92609 795 aa20.1■□□□□ 0.81
CPSF4-203ENST00000430038 DSCC1Q9BVC3 393 aa20.1■□□□□ 0.81
CPSF4-203ENST00000430038 TBX21Q9UL17 535 aa20.1■□□□□ 0.81
CPSF4-203ENST00000430038 DYNC1LI2O43237 492 aaPredicted RBP20.09■□□□□ 0.81
CPSF4-203ENST00000430038 RAG1P15918 1043 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 MFAP1P55081 439 aaKnown RBP20.09■□□□□ 0.81
CPSF4-203ENST00000430038 CXCL17Q6UXB2 119 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 C16orf59Q7L2K0 433 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 DGKHQ86XP1 1220 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 PCSK9Q8NBP7 692 aaKnown RBP20.09■□□□□ 0.81
CPSF4-203ENST00000430038 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 ESR2Q92731 530 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 GLT1D1Q96MS3 346 aa20.09■□□□□ 0.81
CPSF4-203ENST00000430038 UNC80Q8N2C7 3258 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 ARVCFO00192 962 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 ALDH5A1P51649 535 aaPredicted RBP20.08■□□□□ 0.81
CPSF4-203ENST00000430038 TLK2Q86UE8 772 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 FAM126BQ8IXS8 530 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 ENAHQ8N8S7 591 aaPredicted RBP20.08■□□□□ 0.81
CPSF4-203ENST00000430038 SLC43A3Q8NBI5 491 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 RNF41Q9H4P4 317 aaPredicted RBP20.08■□□□□ 0.81
CPSF4-203ENST00000430038 TAF6LQ9Y6J9 622 aa20.08■□□□□ 0.81
CPSF4-203ENST00000430038 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.8
CPSF4-203ENST00000430038 PTPDC1A2A3K4 754 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 DCDC2CA8MYV0 355 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 CD4P01730 458 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 RPS6P62753 249 aaKnown RBP20.07■□□□□ 0.8
CPSF4-203ENST00000430038 TTC22Q5TAA0 569 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 IQSEC1Q6DN90 963 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 FAM109BQ6ICB4 259 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-203ENST00000430038 NOL8Q76FK4 1167 aaKnown RBP20.07■□□□□ 0.8
CPSF4-203ENST00000430038 PNMA1Q8ND90 353 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 VTI1AQ96AJ9 217 aa20.07■□□□□ 0.8
CPSF4-203ENST00000430038 ZSCAN10Q96SZ4 725 aaPredicted RBP20.07■□□□□ 0.8
CPSF4-203ENST00000430038 A0A0U1RQG5 324 aaPredicted RBP20.06■□□□□ 0.8
CPSF4-203ENST00000430038 TIMP1P01033 207 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms