RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 DNAJC2Q99543 621 aaKnown RBP4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 ACTR10Q9NZ32 417 aa4.48□□□□□ -1.69
HMGB1P9-201ENST00000429856 A0A087WZG4 1122 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SSU72P8A0A1W2PR75 194 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 ABLIM1O14639 778 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SMAD7O15105 426 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 ITGA4P13612 1032 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 PCBP3P57721 371 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SNW1Q13573 536 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 NCAPHQ15003 741 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SLC14A2Q15849 920 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 NOL9Q5SY16 702 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 AXDND1Q5T1B0 1012 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 VHLLQ6RSH7 139 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 DPH6Q7L8W6 267 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SIRT2Q8IXJ6 389 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SYT8Q8NBV8 401 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 LINC00116Q8NCU8 138 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 TCTN2Q96GX1 697 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 BDH2Q9BUT1 245 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 DSCC1Q9BVC3 393 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 GBP3Q9H0R5 595 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 CNTD2Q9H8S5 307 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 ZNF408Q9H9D4 720 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 GP6Q9HCN6 339 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 CRTAC1Q9NQ79 661 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 GFOD1Q9NXC2 390 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 CNOT11Q9UKZ1 510 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 R3HCC1Q9Y3T6 440 aaKnown RBP4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 FHOD1Q9Y613 1164 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 MRVI1Q9Y6F6 885 aa4.47□□□□□ -1.69
HMGB1P9-201ENST00000429856 SHOXO15266 292 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 TP53P04637 393 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 GSNP06396 782 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 CD247P20963 164 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 BMP8BP34820 402 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 ETFBP38117 255 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZNF143P52747 638 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 EPHB3P54753 998 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 FXNQ16595 210 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 DCAF15Q66K64 600 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 HEATR6Q6AI08 1181 aaKnown RBP4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 LINC01356Q8N9X3 169 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 LINC01599Q8WXQ3 324 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 HAUS7Q99871 368 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 TANGO6Q9C0B7 1094 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 ADAM7Q9H2U9 754 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 WHRNQ9P202 907 aa4.46□□□□□ -1.7
HMGB1P9-201ENST00000429856 CBFA2T2O43439 604 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 PPM1BO75688 479 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 STK10O94804 968 aaKnown RBP4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 ATP2B1P20020 1258 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 VIPR1P32241 457 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 GALK1P51570 392 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 TEKQ02763 1124 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 KIAA1211LQ6NV74 962 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 NLRX1Q86UT6 975 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 USHBP1Q8N6Y0 703 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 MZB1Q8WU39 189 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 KLHL6Q8WZ60 621 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 ARMC5Q96C12 935 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 PWWP2AQ96N64 755 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 LNPKQ9C0E8 428 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 KLHL25Q9H0H3 589 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 EPB41L4AQ9HCS5 686 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 FAM86C1Q9NVL1 165 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 TCFL5Q9UL49 500 aa4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 DIS3Q9Y2L1 958 aaKnown RBP4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 SF3B6Q9Y3B4 125 aaKnown RBP4.45□□□□□ -1.7
HMGB1P9-201ENST00000429856 ANKRD34BA5PLL1 514 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 RBAK-RBAKDNI3L0D1 243 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 K7ESM1 405 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 IRS4O14654 1257 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 AKAP8O43823 692 aaKnown RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZNF205O95201 554 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 EPHX1P07099 455 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 SYPP08247 313 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 NOP2P46087 812 aaKnown RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 KCNC1P48547 511 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZNF445P59923 1031 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 YBX1P67809 324 aaKnown RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 LARP1BQ659C4 914 aaKnown RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 HHIPL2Q6UWX4 724 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 FAM129CQ86XR2 697 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 FAM178BQ8IXR5 827 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 CKAP2LQ8IYA6 745 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 CRACR2BQ8N4Y2 399 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 FIBCD1Q8N539 461 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 FOXP3Q9BZS1 431 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 EBF1Q9UH73 591 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZMYM5Q9UJ78 669 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 PCDHB10Q9UN67 800 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZNF451Q9Y4E5 1061 aa4.44□□□□□ -1.7
HMGB1P9-201ENST00000429856 CADPSQ9ULU8 1353 aa4.43□□□□□ -1.7
HMGB1P9-201ENST00000429856 MEIS1O00470 390 aa4.43□□□□□ -1.7
HMGB1P9-201ENST00000429856 PNLIPP16233 465 aa4.43□□□□□ -1.7
HMGB1P9-201ENST00000429856 CDK11BP21127 795 aaKnown RBP4.43□□□□□ -1.7
HMGB1P9-201ENST00000429856 RPL10P27635 214 aaKnown RBP4.43□□□□□ -1.7
HMGB1P9-201ENST00000429856 ZXDAP98168 799 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms