RNA–Protein interactions for RNA: ENST00000428695.5

SATB2-203, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene SATB2, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-203ENST00000428695 CNGA4Q8IV77 575 aa20.08■□□□□ 0.8
SATB2-203ENST00000428695 TMEM260Q9NX78 707 aa20.08■□□□□ 0.8
SATB2-203ENST00000428695 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.08■□□□□ 0.89e-8■□□□□ 11.1
SATB2-203ENST00000428695 ZNF646O15015 1829 aaPredicted RBP20.07■□□□□ 0.8
SATB2-203ENST00000428695 TPM1P09493 284 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 GIMAP8Q8ND71 665 aaPredicted RBP20.07■□□□□ 0.8
SATB2-203ENST00000428695 CPLX3Q8WVH0 158 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 COA7Q96BR5 231 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 CCDC51Q96ER9 411 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 GPCPD1Q9NPB8 672 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 TAB2Q9NYJ8 693 aa20.07■□□□□ 0.8
SATB2-203ENST00000428695 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.07■□□□□ 0.8
SATB2-203ENST00000428695 V9GYY5 206 aaPredicted RBP20.07■□□□□ 0.8
SATB2-203ENST00000428695 GYPCP04921 128 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 CASP14P31944 242 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 TECP42680 631 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 APOBEC3HQ6NTF7 200 aaKnown RBP20.06■□□□□ 0.8
SATB2-203ENST00000428695 PPP1R18Q6NYC8 613 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 POTEDQ86YR6 584 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 VPS16Q9H269 839 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 PARP3Q9Y6F1 533 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 SOWAHDA6NJG2 315 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 PSMA7O14818 248 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 FANCGO15287 622 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 MMP10P09238 476 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 DESI2Q9BSY9 194 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 SCN9AQ15858 1988 aa20.06■□□□□ 0.8
SATB2-203ENST00000428695 PNMA6FA0A0J9YX94 578 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 TRIM49BA6NDI0 452 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 PLSCR1O15162 318 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 CCDC175P0C221 793 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 TRIM14Q14142 442 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 MTF1Q14872 753 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 ELF2Q15723 593 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 FLAD1Q8NFF5 587 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 CCDC47Q96A33 483 aaKnown RBP20.05■□□□□ 0.8
SATB2-203ENST00000428695 JMJD4Q9H9V9 463 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 FECHP22830 423 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 FXR1P51114 621 aaKnown RBP eCLIP20.05■□□□□ 0.8
SATB2-203ENST00000428695 CALCRLQ16602 461 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 ADGRF4Q8IZF3 695 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 CALML4Q96GE6 196 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 MTMR9Q96QG7 549 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 C7orf25Q9BPX7 421 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 MMTAG2Q9BU76 263 aaKnown RBP20.05■□□□□ 0.8
SATB2-203ENST00000428695 TRIM9Q9C026 710 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 EHD4Q9H223 541 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 THAP9Q9H5L6 903 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 ARFGEF1Q9Y6D6 1849 aa20.05■□□□□ 0.8
SATB2-203ENST00000428695 CRKP46108 304 aa20.04■□□□□ 0.8
SATB2-203ENST00000428695 PMS1P54277 932 aaKnown RBP20.04■□□□□ 0.8
SATB2-203ENST00000428695 GPATCH4Q5T3I0 446 aaKnown RBP20.04■□□□□ 0.8
SATB2-203ENST00000428695 PODNQ7Z5L7 613 aa20.04■□□□□ 0.8
SATB2-203ENST00000428695 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
SATB2-203ENST00000428695 ZNF397Q8NF99 534 aaPredicted RBP20.04■□□□□ 0.8
SATB2-203ENST00000428695 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
SATB2-203ENST00000428695 MPHOSPH10O00566 681 aaKnown RBP20.03■□□□□ 0.8
SATB2-203ENST00000428695 EEF1GP26641 437 aaKnown RBP20.03■□□□□ 0.8
SATB2-203ENST00000428695 TXKP42681 527 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 GNG11P61952 73 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 AMPD3Q01432 767 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 NFIAQ12857 509 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 RAD9BQ6WBX8 426 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 CREBRFQ8IUR6 639 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 DHTKD1Q96HY7 919 aaPredicted RBP20.03■□□□□ 0.8
SATB2-203ENST00000428695 GTPBP4Q9BZE4 634 aaKnown RBP20.03■□□□□ 0.8
SATB2-203ENST00000428695 RIC8AQ9NPQ8 531 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 EXOC1Q9NV70 894 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 URI1O94763 535 aaPredicted RBP20.03■□□□□ 0.8
SATB2-203ENST00000428695 FXR2P51116 673 aaKnown RBP eCLIP20.03■□□□□ 0.8
SATB2-203ENST00000428695 TRIM47Q96LD4 638 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 ZDHHC15Q96MV8 337 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 DBNDD1Q9H9R9 158 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 ADGRG1Q9Y653 693 aa20.03■□□□□ 0.8
SATB2-203ENST00000428695 SLX4Q8IY92 1834 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 CASQ1P31415 396 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 ASIC1P78348 528 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 CCDC96Q2M329 555 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 TMEM266Q2M3C6 531 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 TTI2Q6NXR4 508 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 LRRN4CLQ8ND94 238 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 NOC3LQ8WTT2 800 aaKnown RBP20.02■□□□□ 0.8
SATB2-203ENST00000428695 ZNF622Q969S3 477 aaKnown RBP eCLIP20.02■□□□□ 0.83e-6■■■□□ 17
SATB2-203ENST00000428695 CCDC17Q96LX7 622 aa20.02■□□□□ 0.8
SATB2-203ENST00000428695 MRPL44Q9H9J2 332 aaKnown RBP20.02■□□□□ 0.8
SATB2-203ENST00000428695 SLC37A4O43826 429 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 PPP1R11O60927 126 aaPredicted RBP20.02■□□□□ 0.79
SATB2-203ENST00000428695 TDP2O95551 362 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 ATP2B2Q01814 1243 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 UBXN1Q04323 297 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 PDE4DQ08499 809 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 TTBK2Q6IQ55 1244 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 WDR24Q96S15 920 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.79
SATB2-203ENST00000428695 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.79
SATB2-203ENST00000428695 APBA3O96018 575 aa20.01■□□□□ 0.79
SATB2-203ENST00000428695 PPP1R2P41236 205 aa20.01■□□□□ 0.79
SATB2-203ENST00000428695 TMTC1Q8IUR5 882 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms