RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TIMP1P01033 207 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 EPHB4P54760 987 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 PPIGQ13427 754 aaKnown RBP eCLIP19.06■□□□□ 0.643e-16■□□□□ 10.5
COL18A1-205ENST00000423214 NSMFQ6X4W1 530 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 CDX2Q99626 313 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-205ENST00000423214 AP5M1Q9H0R1 490 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 SEMA6BQ9H3T3 888 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 CYP39A1Q9NYL5 469 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 TBX21Q9UL17 535 aa19.06■□□□□ 0.64
COL18A1-205ENST00000423214 ZMYM6O95789 1325 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 A0A0D9SFI3 127 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 ARVCFO00192 962 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 ICAM1P05362 532 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 BEX3Q00994 111 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 HDAC1Q13547 482 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-205ENST00000423214 ALX1Q15699 326 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 MCMDC2Q4G0Z9 681 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 FAM227BQ96M60 508 aa19.05■□□□□ 0.64
COL18A1-205ENST00000423214 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 ZEB2O60315 1214 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
COL18A1-205ENST00000423214 FOSL2P15408 326 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 FBXO16Q8IX29 292 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-205ENST00000423214 MAFAQ8NHW3 353 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-205ENST00000423214 MYLIPQ8WY64 445 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 PPP1R12CQ9BZL4 782 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
COL18A1-205ENST00000423214 TTYH1Q9H313 450 aaPredicted RBP19.04■□□□□ 0.64
COL18A1-205ENST00000423214 KIAA1217Q5T5P2 1943 aa19.04■□□□□ 0.64
COL18A1-205ENST00000423214 FRMPD2Q68DX3 1309 aaPredicted RBP19.03■□□□□ 0.64
COL18A1-205ENST00000423214 CCDC171Q6TFL3 1326 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 TANC1Q9C0D5 1861 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 DNAJB2P25686 324 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 SLC16A2P36021 539 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 CDK7P50613 346 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 FSCN1Q16658 493 aaKnown RBP19.03■□□□□ 0.64
COL18A1-205ENST00000423214 SYDE2Q5VT97 1194 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 EEPD1Q7L9B9 569 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 FAM126BQ8IXS8 530 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 TMEM199Q8N511 208 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 RILPL2Q969X0 211 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 VTA1Q9NP79 307 aa19.03■□□□□ 0.64
COL18A1-205ENST00000423214 ASTN1O14525 1302 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 CTAGE5O15320 804 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 CABYRO75952 493 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 FGAP02671 866 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 HSPD1P10809 573 aaKnown RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 NOVP48745 357 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 MFAP1P55081 439 aaKnown RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 HAND2P61296 217 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 NKX3-2P78367 333 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 NMIQ13287 307 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 PSRC1Q6PGN9 363 aaPredicted RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 CXCL17Q6UXB2 119 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 TICAM2Q86XR7 235 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.02■□□□□ 0.644e-18■■□□□ 14.3
COL18A1-205ENST00000423214 LNPKQ9C0E8 428 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 GPCPD1Q9NPB8 672 aa19.02■□□□□ 0.64
COL18A1-205ENST00000423214 ADD3Q9UEY8 706 aaKnown RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 GNEQ9Y223 722 aaKnown RBP19.02■□□□□ 0.64
COL18A1-205ENST00000423214 PTPDC1A2A3K4 754 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 FGRP09769 529 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 CSF2RAP15509 400 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 TTBK2Q6IQ55 1244 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 ZNF589Q86UQ0 364 aaPredicted RBP19.01■□□□□ 0.63
COL18A1-205ENST00000423214 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 DDX49Q9Y6V7 483 aaKnown RBP19.01■□□□□ 0.63
COL18A1-205ENST00000423214 SCN5AQ14524 2016 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 SCN10AQ9Y5Y9 1956 aa19.01■□□□□ 0.63
COL18A1-205ENST00000423214 DYNC1LI2O43237 492 aaPredicted RBP19■□□□□ 0.63
COL18A1-205ENST00000423214 PCP11498 1178 aaKnown RBP19■□□□□ 0.63
COL18A1-205ENST00000423214 SMPD1P17405 629 aa19■□□□□ 0.63
COL18A1-205ENST00000423214 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
COL18A1-205ENST00000423214 BTNL9Q6UXG8 535 aa19■□□□□ 0.63
COL18A1-205ENST00000423214 RNF41Q9H4P4 317 aaPredicted RBP19■□□□□ 0.63
COL18A1-205ENST00000423214 PDGFCQ9NRA1 345 aa19■□□□□ 0.63
COL18A1-205ENST00000423214 TCP11L1Q9NUJ3 509 aa19■□□□□ 0.63
COL18A1-205ENST00000423214 PRUNE2Q8WUY3 3088 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 NFIBO00712 420 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 PDHBP11177 359 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 ALDH5A1P51649 535 aaPredicted RBP18.99■□□□□ 0.63
COL18A1-205ENST00000423214 ITGA7Q13683 1181 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 BAATQ14032 418 aaPredicted RBP18.99■□□□□ 0.63
COL18A1-205ENST00000423214 TMEM240Q5SV17 173 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 AKNAD1Q5T1N1 836 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 TAPT1Q6NXT6 567 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 MFSD6Q6ZSS7 791 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 KIAA1211Q6ZU35 1233 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 MPHOSPH6Q99547 160 aaKnown RBP18.99■□□□□ 0.63
COL18A1-205ENST00000423214 MTIF3Q9H2K0 278 aaKnown RBP18.99■□□□□ 0.63
COL18A1-205ENST00000423214 HIPK3Q9H422 1215 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 PNMA2Q9UL42 364 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 Q9Y3F1 56 aa18.99■□□□□ 0.63
COL18A1-205ENST00000423214 CD4P01730 458 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 PTGS1P23219 599 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 CALML3P27482 149 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms