RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
NUP50-206ENST00000422489 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
NUP50-206ENST00000422489 SYNRGQ9UMZ2 1314 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
NUP50-206ENST00000422489 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 DYNC1LI2O43237 492 aaPredicted RBP10.89□□□□□ -0.67
NUP50-206ENST00000422489 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
NUP50-206ENST00000422489 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
NUP50-206ENST00000422489 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 CALML3P27482 149 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 ZNF543Q08ER8 600 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 NUP133Q8WUM0 1156 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 BADQ92934 168 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
NUP50-206ENST00000422489 AP5M1Q9H0R1 490 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 CPVLQ9H3G5 476 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 STARD7Q9NQZ5 370 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 MYH8P13535 1937 aa10.89□□□□□ -0.67
NUP50-206ENST00000422489 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 TRIM43BA6NCK2 446 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 MYADML2A6NDP7 307 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 NFIBO00712 420 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 ASGR1P07306 291 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 CHMLP26374 656 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 BEX3Q00994 111 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 USH1GQ495M9 461 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 GPATCH4Q5T3I0 446 aaKnown RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 IQSEC1Q6DN90 963 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 RNF207Q6ZRF8 634 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 PCSK9Q8NBP7 692 aaKnown RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 TRIM43Q96BQ3 446 aaPredicted RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 GLT1D1Q96MS3 346 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 UBAC1Q9BSL1 405 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 IL25Q9H293 177 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 CNNM2Q9H8M5 875 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 PDGFCQ9NRA1 345 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 TMEM39AQ9NV64 488 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 ADD3Q9UEY8 706 aaKnown RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 BRCA2P51587 3418 aa10.88□□□□□ -0.67
NUP50-206ENST00000422489 MKI67P46013 3256 aaKnown RBP10.88□□□□□ -0.67
NUP50-206ENST00000422489 TNKSO95271 1327 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 ADCY6O43306 1168 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 CLTBP09497 229 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 SNHG28P0DPA3 235 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 RAG1P15918 1043 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 NT5C2P49902 561 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 GJA9P57773 515 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 PTH1RQ03431 593 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 TRDNQ13061 729 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 SNX17Q15036 470 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 IFIT1BQ5T764 474 aaKnown RBP10.87□□□□□ -0.67
NUP50-206ENST00000422489 C1orf53Q5VUE5 145 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
NUP50-206ENST00000422489 ENAHQ8N8S7 591 aaPredicted RBP10.87□□□□□ -0.67
NUP50-206ENST00000422489 CLEC4DQ8WXI8 215 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 ANKS1AQ92625 1134 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 KATNBL1Q9H079 304 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 PNMA2Q9UL42 364 aa10.87□□□□□ -0.67
NUP50-206ENST00000422489 PARP1P09874 1014 aaKnown RBP10.86□□□□□ -0.67
NUP50-206ENST00000422489 SMPD1P17405 629 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 PTGS1P23219 599 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 ALDH5A1P51649 535 aaPredicted RBP10.86□□□□□ -0.67
NUP50-206ENST00000422489 PDE4DQ08499 809 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 SHHQ15465 462 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 LRIT3Q3SXY7 679 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 TMEM63BQ5T3F8 832 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 CCSAPQ6IQ19 270 aaPredicted RBP10.86□□□□□ -0.67
NUP50-206ENST00000422489 TAPT1Q6NXT6 567 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 ADGRF4Q8IZF3 695 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 UPF3AQ9H1J1 476 aaKnown RBP10.86□□□□□ -0.67
NUP50-206ENST00000422489 PDLIM7Q9NR12 457 aa10.86□□□□□ -0.67
NUP50-206ENST00000422489 ASTN1O14525 1302 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 IFIT3O14879 490 aaKnown RBP10.85□□□□□ -0.67
NUP50-206ENST00000422489 ZEB2O60315 1214 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 CYP21A2P08686 494 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
NUP50-206ENST00000422489 FAAP100Q0VG06 881 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 CDC37Q16543 378 aaPredicted RBP10.85□□□□□ -0.67
NUP50-206ENST00000422489 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 CXCL17Q6UXB2 119 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 TLK2Q86UE8 772 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 DEFB123Q8N688 67 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 TBC1D5Q92609 795 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 MPHOSPH6Q99547 160 aaKnown RBP10.85□□□□□ -0.67
NUP50-206ENST00000422489 WDR11Q9BZH6 1224 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
NUP50-206ENST00000422489 ELP1O95163 1332 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 RAD50Q92878 1312 aa10.84□□□□□ -0.67
NUP50-206ENST00000422489 A0A0U1RQG5 324 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms