RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FSD1Q9BTV5 496 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 PBX4Q9BYU1 374 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 LRRC37A2A6NM11 1700 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 ACRP10323 421 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 CYP2C18P33260 490 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 PBX2P40425 430 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 FSCN1Q16658 493 aaKnown RBP19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 KCTD1Q719H9 257 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 USP38Q8NB14 1042 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 SEZ6LQ9BYH1 1024 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 AP5M1Q9H0R1 490 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 IL23AQ9NPF7 189 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 STX8Q9UNK0 236 aa19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
UPF3AP3-201ENST00000420996 VCANP13611 3396 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 TSPY2A6NKD2 308 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 ZEB2O60315 1214 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 ITGA7Q13683 1181 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 IQSEC1Q6DN90 963 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 HERVK_113Q902F9 699 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 CHMP4CQ96CF2 233 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 GAS2L1Q99501 681 aaPredicted RBP19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 IL17RBQ9NRM6 502 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 CYP39A1Q9NYL5 469 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 PRR12Q9ULL5 1215 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 Q9Y3F1 56 aa19.98■□□□□ 0.79
UPF3AP3-201ENST00000420996 DYNC1LI2O43237 492 aaPredicted RBP19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 SMPD1P17405 629 aa19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 MUM1L1Q5H9M0 696 aa19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 MTIF3Q9H2K0 278 aaKnown RBP19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 HIPK3Q9H422 1215 aa19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 PDGFCQ9NRA1 345 aa19.97■□□□□ 0.79
UPF3AP3-201ENST00000420996 LCTP09848 1927 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 FOXP2O15409 715 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 FGBP02675 491 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 SNAP25P60880 206 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 CTDSPL2Q05D32 466 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 RAB30Q15771 203 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 TJAP1Q5JTD0 557 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 TAPT1Q6NXT6 567 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 OTUD7AQ8TE49 926 aaPredicted RBP19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 INCENPQ9NQS7 918 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 PRDM6Q9NQX0 595 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 MSRAQ9UJ68 235 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 GRIN2DO15399 1336 aa19.96■□□□□ 0.79
UPF3AP3-201ENST00000420996 MYO9BQ13459 2157 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 GBF1Q92538 1859 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 NMT2O60551 498 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 MX1P20591 662 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 NOVP48745 357 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 AKNAD1Q5T1N1 836 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 MORC4Q8TE76 937 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 PRDM12Q9H4Q4 367 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 VTA1Q9NP79 307 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 CXXC1Q9P0U4 656 aaPredicted RBP19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 ANAPC4Q9UJX5 808 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 PCDHB15Q9Y5E8 787 aa19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
UPF3AP3-201ENST00000420996 RANBP6O60518 1105 aaKnown RBP19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 ICAM1P05362 532 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 PTGS1P23219 599 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 NSMFQ6X4W1 530 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 EEPD1Q7L9B9 569 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 FBXO16Q8IX29 292 aaPredicted RBP19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 DCAF4Q8WV16 495 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 UMODL1Q5DID0 1318 aa19.94■□□□□ 0.78
UPF3AP3-201ENST00000420996 BTNL9Q6UXG8 535 aa19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 KIAA1211Q6ZU35 1233 aa19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 RASGRP2Q7LDG7 609 aa19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 NOC4LQ9BVI4 516 aaKnown RBP19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 RANBP17Q9H2T7 1088 aaKnown RBP19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 ADD3Q9UEY8 706 aaKnown RBP19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 MTMR7Q9Y216 660 aa19.93■□□□□ 0.78
UPF3AP3-201ENST00000420996 ORC4O43929 436 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 B4GALT4O60513 344 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 FGRP09769 529 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 CCL23P55773 120 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 ALX1Q15699 326 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 CCDC96Q2M329 555 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 DUSP28Q4G0W2 176 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 TMEM63BQ5T3F8 832 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 OTOP2Q7RTS6 562 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 RPUSD2Q8IZ73 545 aaKnown RBP19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 PURBQ96QR8 312 aaKnown RBP19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 SLC28A3Q9HAS3 691 aa19.92■□□□□ 0.78
UPF3AP3-201ENST00000420996 LOC102724159A0A0B4J2E5 919 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 PSMC6P62333 389 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 BAATQ14032 418 aaPredicted RBP19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 PWP2Q15269 919 aaKnown RBP19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 VPS53Q5VIR6 699 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 TTBK2Q6IQ55 1244 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 ATXN2LQ8WWM7 1075 aaKnown RBP19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 PPM1EQ8WY54 764 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 WNT8AQ9H1J5 351 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 NKX2-4Q9H2Z4 354 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 SALL3Q9BXA9 1300 aa19.91■□□□□ 0.78
UPF3AP3-201ENST00000420996 SLC16A2P36021 539 aa19.9■□□□□ 0.78
UPF3AP3-201ENST00000420996 ALDH5A1P51649 535 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms